DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment niki and AT3G55580

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_191117.1 Gene:AT3G55580 / 824723 AraportID:AT3G55580 Length:488 Species:Arabidopsis thaliana


Alignment Length:437 Identity:107/437 - (24%)
Similarity:159/437 - (36%) Gaps:119/437 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 DFGISKIMNTKIHAQTVLGTPYYFSPEMCEGKEYDNKSDIWALGCILGEMCCLKKTFAASNLSEL 312
            |.|.|.:.:.| |.:|  ..|:...||:|..|....    || .|:           |.:...::
plant    93 DLGQSYVTSGK-HGET--PEPFPLPPEVCVQKAEAG----WA-HCV-----------AVTENQQV 138

  Fly   313 VTKIMAGNYTPVPSGYTSGL-------RSLMSNLLQVEAPRRPTASEVLVYWIPLIFRSLGKNKG 370
            .|   .|....:|:|...|.       |::..:..||.:                  .|.||...
plant   139 YT---WGWRECIPTGRVFGQVDGDSCERNISFSTEQVSS------------------SSQGKKSS 182

  Fly   371 YSYEDDVGGPGSDQLT-----APVPAAAYSNVSMELELPTAQTETKQLMIADTAAPHEILEKRSV 430
            ......|.|.|..:.|     :|...||.:         ::|::...|    :|.|         
plant   183 GGTSSQVEGRGGGEPTKKRRISPSKQAAEN---------SSQSDNIDL----SALP--------- 225

  Fly   431 LYQLKAFGTCFSMAPIQLPPKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGL---TALEAW 492
                     |.    :.|.|...||.||....|.:.:::.|..:.||.|..|||||   ..|.:.
plant   226 ---------CL----VSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSS 277

  Fly   493 KH---------YPSRMESVRNYHVVSAC------------AGDGFTILVTQAGSLLSCGSNAHLA 536
            .|         |.....|..|...|..|            .|...:.::|..|:||:.|...:..
plant   278 PHPIPCIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQ 342

  Fly   537 LGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFP 601
            .||....:..||..::.|..:|:|:|||||.|....|.:|.||.:|.:..|.||.| ..|.:..|
plant   343 CGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTG-CDQAETLP 406

  Fly   602 QKIL----LSHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLG 644
             |:|    |.:|..|  .|.||...:||:...|.:...|.|.|.:||
plant   407 -KLLEAPNLENVNVK--TISCGARHTAVITDEGRVFCWGWNKYGQLG 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 23/117 (20%)
S_TKc 105..354 CDD:214567 23/112 (21%)
ATS1 445..747 CDD:227511 69/228 (30%)
AT3G55580NP_191117.1 ATS1 83..463 CDD:227511 107/437 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.