DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment niki and AT3G47660

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_001325559.1 Gene:AT3G47660 / 823920 AraportID:AT3G47660 Length:990 Species:Arabidopsis thaliana


Alignment Length:543 Identity:119/543 - (21%)
Similarity:189/543 - (34%) Gaps:161/543 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 LGCILGEMCCLKKTFAASNLSELVTKIMAGNYTPVPSGYTSGLRSLMSNLLQVEAPRRPTASEVL 354
            ||.:..|:........|.:|.|||.|           .:||...::.:......:|...|:.   
plant   219 LGKVFSEVLSQTAVLKALSLDELVHK-----------PHTSPPETIENRPTNHSSPGVDTSK--- 269

  Fly   355 VYWIPLIFRSLGKNKGYSYED-----DV------------------GGPGSDQLT-APVPAAAYS 395
             |.|.....|  .::|.::||     ||                  .|..|..:| :.:|....|
plant   270 -YSISSAVSS--SSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKS 331

  Fly   396 NVSMELELPTAQTETKQLMIADTAAPHEILEKRSVLYQ-------LKAFGTCFSMAPIQLPPKAV 453
            :|:::.:..:..|....|           :.|:..:|.       ....|.| |..|   .||.:
plant   332 HVALDAQSISCGTNYAVL-----------VTKQGQMYSWGEESGGRLGHGVC-SYVP---HPKLI 381

  Fly   454 ------IVDVA-MSDSHFVVVNEDGSAYAWGEGTH--GQLGL-TALEAWKHYPSR----MESVRN 504
                  .|::| ..:.|...|...|..||||:|.|  |.||| :....||  |.|    ||.:  
plant   382 DEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWK--PVRILGQMEGI-- 442

  Fly   505 YHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHV 569
             :|.:...|...|..||..|.|.:.|.....|||..::.:.:.|:.:..|...|..:.|.|:.|.
plant   443 -YVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHS 506

  Fly   570 LAL-------SREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHV----KTKPSKIYCGPDTS 623
            .|:       :..|.::.||....|.||.|:.:      .:::.|.|    .|...::.||...:
plant   507 AAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIE------CRLIPSCVTELDTTSFQQVACGQSIT 565

  Fly   624 AVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLPHKVTQA--CFSSTHSVFLVEGGY----- 681
            ..|..:|:::..|:.|.:                   |.:.:|  |         :|||.     
plant   566 VALSMSGQVYAMGTADPS-------------------HDIVRAPSC---------IEGGLGKSFV 602

  Fly   682 ------------------VYTMGRNAEGQRGIRHCNSVDHPTLVDSVKSRYIVKANCSDQCTIVA 728
                              |||.|:.:.||.|.........||||.::|.:.:.|..|....|...
plant   603 QEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 667

  Fly   729 SEDNIITVWGTRNGLPGIGSTNC 751
            .....||         |..||.|
plant   668 CLHKPIT---------GTDSTKC 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 14/68 (21%)
S_TKc 105..354 CDD:214567 13/63 (21%)
ATS1 445..747 CDD:227511 82/351 (23%)
AT3G47660NP_001325559.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.