DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment niki and nek4

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_001072768.1 Gene:nek4 / 780225 XenbaseID:XB-GENE-5914376 Length:791 Species:Xenopus tropicalis


Alignment Length:525 Identity:154/525 - (29%)
Similarity:230/525 - (43%) Gaps:101/525 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LANYEKVRVVGQGSFGIAILYRRKSDGHQIVFKQINLSELSPPGRDLAMNEVDVFSKLHHPNIVS 166
            |..|..:|.||:||:|...|.|.::.|.|.|.|::||...|...|..|..|..:.|.|.|||||:
 Frog     7 LGEYVLIRPVGKGSYGEVSLVRHRTLGKQFVIKKLNLQSASRRERKAAEQEARLLSHLKHPNIVA 71

  Fly   167 YLGSFI-KDNTLLIEMEYADGGTLAQIIAERQGKLHFPERYIIAVFEQISSAINYMHSENILHRD 230
            |..|:. :|..|.|.|.:.:||.|...:.|::||| ..|..::..|.||:.|:.|:|.|:|:|||
 Frog    72 YRESWEGEDGMLYIAMGFCEGGDLYHKLKEQKGKL-LLESQVMDWFIQIAMALQYLHEEHIMHRD 135

  Fly   231 LKTANVFLNRRGIVKIGDFGISKIMNTKIH-AQTVLGTPYYFSPEMCEGKEYDNKSDIWALGCIL 294
            |||.||||.|..|:|:||.||::::.::.. |.|::|||||.|||:...|.|:.|||:|||||.:
 Frog   136 LKTQNVFLTRSNIIKVGDLGIARVLESQYDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCV 200

  Fly   295 GEMCCLKKTFAASNLSELVTKIMAGNYTPVPSGYTSGLRSLMSNLLQVEAPRRPTASEVL----- 354
            .|:..|:..|.|.:::.||.:|:.|...|:|..|:..|..|::.:|..:..:||:..::|     
 Frog   201 YEIATLRHAFNAKDMNSLVYRIIEGKLPPMPKDYSKELGDLIATMLNRQPEKRPSVKQILHKPFI 265

  Fly   355 VYWIPLIFRSL--------GKNKGYSYEDDVGGPGSDQLTAPVPAAAYSNVSMELELPTAQTETK 411
            .:.|.|..::.        .|....|..|....|..:....|.||..          |..:...|
 Frog   266 RHHISLFLQATKLKHCKHKRKVSASSLSDIPASPQHEDPALPKPACD----------PPRKVPPK 320

  Fly   412 QLMIADTAAPHEILEKRSVLYQLKAFGTCFSMAPIQLPPKA---------VIVDVAMSDSHFVVV 467
            :|              ||:...:.| |:..|.:.|..|..|         .:..::..|......
 Frog   321 KL--------------RSLAKNVPA-GSAPSSSDIGAPEPANNGLSHTGVSLATLSNVDIGIAAA 370

  Fly   468 NEDGSA----YAWGEGTHG-----------QLGLTALEAWKH---------------YPSRMESV 502
            ..|.||    ...|...:|           |||....|...|               :||.||. 
 Frog   371 EHDRSAPDHPIPAGNPANGHVTEQPERRRVQLGSHTAEGKAHLNSISRVEKSHSGALHPSNMEE- 434

  Fly   503 RNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQ 567
                       .|.|:.:.|.|:       .|.....||:.. .:.||:.....| :||.||...
 Frog   435 -----------QGDTMKLLQPGT-------QHGKSPTDEELE-STDKLLEPFVPV-MEQAAASHA 479

  Fly   568 HVLAL 572
            ...||
 Frog   480 EKAAL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 102/261 (39%)
S_TKc 105..354 CDD:214567 101/250 (40%)
ATS1 445..747 CDD:227511 34/167 (20%)
nek4NP_001072768.1 STKc_Nek4 9..265 CDD:270862 102/256 (40%)
S_TKc 10..265 CDD:214567 102/255 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132059at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X891
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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