DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and hectd3

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_001072497.1 Gene:hectd3 / 779952 XenbaseID:XB-GENE-5937967 Length:845 Species:Xenopus tropicalis


Alignment Length:174 Identity:41/174 - (23%)
Similarity:62/174 - (35%) Gaps:34/174 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   508 VSACAGDGFTILVTQAGSLLSCGSNAHLALGQD--EQRN-YHSPKLIARLADVR------VEQVA 563
            ::.|..:|..:.:  .|..:.......|.|..|  :..| ...|:|.|...||.      |::..
 Frog   337 ITQCLDEGIDVRI--RGLKIKSSKRRDLGLTADLFQPNNLVRYPRLEAIEPDVLYHRAVVVQRFV 399

  Fly   564 AGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKI-YC-------GP 620
            ..|.:||    ...|..|..|      :|.:.|.:...|.:|||  |.:.|.| .|       .|
 Frog   400 KLLDNVL----NHMVPAWDHS------IGTFNQLKHIKQFLLLS--KCRSSLITQCLKDSETMKP 452

  Fly   621 DTSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLPHKVT 664
            |....|:.|..:.|   ...:......|.|.|.|.:|....|:|
 Frog   453 DFMPCLYINRRIAV---EHRDNPSLDPSYKKTVFSQVYEGLKLT 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855
S_TKc 105..354 CDD:214567
ATS1 445..747 CDD:227511 41/174 (24%)
hectd3NP_001072497.1 APC10-HECTD3 222..355 CDD:176487 3/19 (16%)
HECTc 512..837 CDD:421431
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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