DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment niki and Nek5

DIOPT Version :10

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:XP_008769592.1 Gene:Nek5 / 685440 RGDID:1593817 Length:677 Species:Rattus norvegicus


Alignment Length:252 Identity:100/252 - (39%)
Similarity:163/252 - (64%) Gaps:7/252 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 YEKVRVVGQGSFGIAILYRRKSDGHQIVFKQINLSELSPPGRDLAMNEVDVFSKLHHPNIVSYLG 169
            ::.::::|:|:||...|.:.||:....|.|:|:|::    .::.:.|||.:.:|:.|.|||::..
  Rat     4 FDLIKIIGEGTFGKVYLAKDKSESCHCVIKEISLTK----EKEASKNEVTLLAKMKHSNIVTFFS 64

  Fly   170 SFIKDNTLLIEMEYADGGTLAQIIAERQGKLHFPERYIIAVFEQISSAINYMHSENILHRDLKTA 234
            ||.:::.|.|.|||.|||.|.:.|..::|.| |.|..|:..|.|||..:.::|.:.:||||:|:.
  Rat    65 SFQENSRLFIVMEYCDGGDLMERIQRQRGVL-FSEDQILCWFVQISLGLKHIHDKKVLHRDIKSQ 128

  Fly   235 NVFLNRRGIV-KIGDFGISKIMNTKIH-AQTVLGTPYYFSPEMCEGKEYDNKSDIWALGCILGEM 297
            |:||::.|:| |:||||.::.:|..:. |||..|||||.|||:|:.:.|:||:|||:|||:|.|:
  Rat   129 NIFLSKNGMVAKLGDFGTARTLNNSMELAQTCAGTPYYLSPEICQNRPYNNKTDIWSLGCVLYEL 193

  Fly   298 CCLKKTFAASNLSELVTKIMAGNYTPVPSGYTSGLRSLMSNLLQVEAPRRPTASEVL 354
            |.||..|.:.||..||.||..|...|:...::..|:||:..|.:|....||:.:.:|
  Rat   194 CTLKHPFESDNLHHLVLKICQGRVAPISPHFSLDLQSLIPQLFRVSPQDRPSINSLL 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 100/252 (40%)
ATS1 433..749 CDD:444065
Nek5XP_008769592.1 Protein Kinases, catalytic domain 3..255 CDD:473864 100/252 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.