DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and herc5.1

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:XP_017211386.1 Gene:herc5.1 / 559981 ZFINID:ZDB-GENE-090311-56 Length:884 Species:Danio rerio


Alignment Length:404 Identity:87/404 - (21%)
Similarity:133/404 - (32%) Gaps:138/404 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   443 MAPIQLPPKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHV 507
            |.|::......::.:|..|.|.:.:..||..:.|||...|||||                     
Zfish     1 MIPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGL--------------------- 44

  Fly   508 VSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLAL 572
                                           :.||....||:.:..|..:.|.|::||..|...|
Zfish    45 -------------------------------RKEQAGTQSPRHLQSLCGIPVAQISAGGNHSFVL 78

  Fly   573 SREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCGPDTSAVLFANGELHVCGS 637
            |..|.|:.||.::.|.||||:  ...:|...::.|..:.|...|.||.:.:|.|...|.:...||
Zfish    79 SLSGVVFGWGGNSAGQLGLGD--TTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGS 141

  Fly   638 NDYNKLGFQRSAKITAFKKVQLPH--------KVTQACFSSTHS-VFLVEGGYVYTMGRNAEGQR 693
            ..:.:||.      .:||....|.        ||:|......|: |.......:|:.|...:||.
Zfish   142 GGFGQLGH------NSFKDEHHPRLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQL 200

  Fly   694 GIRHCNS----------VDHPTLVDSVKSRYIVKANCSDQCTI---VASEDNIITVWGTRNGLPG 745
            |    |.          ||.||             ..:|:.||   ||.|::...::..      
Zfish   201 G----NGEQVKQSVPLPVDQPT-------------EYNDEYTIQKLVAGENHSFALYFK------ 242

  Fly   746 IGSTNCGLGLQICTPNMELELGNNT--------AAFTNFLASVYKSELILEP----VDILALFSS 798
                               ||||..        ..|.|  ..:.:.|...:|    .|:..:|||
Zfish   243 -------------------ELGNEANPDPTRGIMTFDN--GMIEQCECGKDPRKAIKDLKKVFSS 286

  Fly   799 KEQCDRGYYVQVHD 812
            ....:..:....||
Zfish   287 AASLNGSFLKTRHD 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855
S_TKc 105..354 CDD:214567
ATS1 445..747 CDD:227511 72/323 (22%)
herc5.1XP_017211386.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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