DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and nek12

DIOPT Version :10

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_001017548.1 Gene:nek12 / 548344 ZFINID:ZDB-GENE-050410-11 Length:488 Species:Danio rerio


Alignment Length:257 Identity:105/257 - (40%)
Similarity:155/257 - (60%) Gaps:4/257 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LANYEKVRVVGQGSFGIAILYRRKSDGHQIVFKQINL-SELSPPGRDLAMNEVDVFSKLHHPNIV 165
            :..|:||..:|||..|:..|.:..........|:|:: |......:|:.:.|..|...|.||:|:
Zfish     1 MEKYDKVLTLGQGGAGVVSLMKHVDTKKLCAVKRIHVDSSRKTKTKDVVLQEAIVLRSLKHPHII 65

  Fly   166 SYLGSFI--KDNTLLIEMEYADGGTLAQIIAERQGKLHFPERYIIAVFEQISSAINYMHSENILH 228
            :::.:|.  .:.::.|.|:|.|||||...|.|::...||.|..|:..|.|:..|::|:|||.|||
Zfish    66 TWIDTFFDATNESIYIVMDYCDGGTLDDHIKEQKCGEHFTESNIMDWFVQVVMAVSYIHSEKILH 130

  Fly   229 RDLKTANVFLNRRGIVKIGDFGISKIMN-TKIHAQTVLGTPYYFSPEMCEGKEYDNKSDIWALGC 292
            ||:|.:||.|.:||::|:|||||||||| |...|.|.:|||.|.|||:|:...|..||||||:||
Zfish   131 RDIKPSNVLLTKRGVIKLGDFGISKIMNHTLDMASTCVGTPSYLSPELCQDVPYSTKSDIWAVGC 195

  Fly   293 ILGEMCCLKKTFAASNLSELVTKIMAGNYTPVPSGYTSGLRSLMSNLLQVEAPRRPTASEVL 354
            :|.|:|.||..|.|.||..|..||:.|.|..||..|:..:.:|:..:|.:....||:|:.:|
Zfish   196 LLYELCALKPAFQAKNLLSLFYKIIKGEYIKVPEMYSEDIHTLIEKMLSLIPENRPSAASIL 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 105/255 (41%)
ATS1 433..749 CDD:444065
nek12NP_001017548.1 STKc_Nek 3..262 CDD:270855 105/255 (41%)
Blue background indicates that the domain is not in the aligned region.

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