DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment niki and NEK2

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_002488.1 Gene:NEK2 / 4751 HGNCID:7745 Length:445 Species:Homo sapiens


Alignment Length:370 Identity:122/370 - (32%)
Similarity:191/370 - (51%) Gaps:58/370 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 MPNRQESLLQLSVPRETGVGVAGPELANYEKVRVVGQGSFGIAILYRRKSDGHQIVFKQINLSEL 141
            ||:|.|                     :||.:..:|.||:|.....||||||..:|:|:::...:
Human     1 MPSRAE---------------------DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM 44

  Fly   142 SPPGRDLAMNEVDVFSKLHHPNIVSYLGSFI--KDNTLLIEMEYADGGTLAQIIA----ERQGKL 200
            :...:.:.::||::..:|.|||||.|....|  .:.||.|.|||.:||.||.:|.    |||   
Human    45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQ--- 106

  Fly   201 HFPERYIIAVFEQISSAINYMH-----SENILHRDLKTANVFLNRRGIVKIGDFGISKIMNTKIH 260
            :..|.:::.|..|::.|:...|     ...:||||||.|||||:.:..||:||||:::|:|   |
Human   107 YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN---H 168

  Fly   261 ----AQTVLGTPYYFSPEMCEGKEYDNKSDIWALGCILGEMCCLKKTFAASNLSELVTKIMAGNY 321
                |:|.:|||||.|||......|:.|||||:|||:|.|:|.|...|.|.:..||..||..|.:
Human   169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF 233

  Fly   322 TPVPSGYTSGLRSLMSNLLQVEAPRRPTASEVLVYWIPLIFRSLGKNKGYSYE---DDVGGPGSD 383
            ..:|..|:..|..:::.:|.::...||:..|:|..  |||...:...:..:.|   ..:|.|...
Human   234 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN--PLIADLVADEQRRNLERRGRQLGEPEKS 296

  Fly   384 QLTAPVPAAAYSNVSMELELPTAQTETKQLMIADTAAPHEILEKR 428
            |.::||.:        ||:|...|.:.::..:   .|..|.||::
Human   297 QDSSPVLS--------ELKLKEIQLQERERAL---KAREERLEQK 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 101/269 (38%)
S_TKc 105..354 CDD:214567 100/263 (38%)
ATS1 445..747 CDD:227511
NEK2NP_002488.1 STKc_Nek2 7..271 CDD:270857 102/271 (38%)
Interaction with PCNT. /evidence=ECO:0000269|PubMed:20599736 264..445 19/80 (24%)
Interaction with CEP85. /evidence=ECO:0000269|PubMed:26220856 301..445 10/41 (24%)
Leucine-zipper 306..334 7/28 (25%)
Necessary for interaction with MAD1L1. /evidence=ECO:0000269|PubMed:14978040 329..445 0/2 (0%)
Required for microtubule binding and for localization to the centrosomes 333..370
Interaction with SAV1 and STK3/MST2. /evidence=ECO:0000269|PubMed:21076410 403..439
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132059at33208
OrthoFinder 1 1.000 - - FOG0000168
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R445
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.950

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