DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment niki and nek8

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:XP_012812229.1 Gene:nek8 / 448753 XenbaseID:XB-GENE-990378 Length:698 Species:Xenopus tropicalis


Alignment Length:723 Identity:235/723 - (32%)
Similarity:377/723 - (52%) Gaps:57/723 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LANYEKVRVVGQGSFGIAILYRRKSDGHQIVFKQINLSELSPPGRDLAMNEVDVFSKLHHPNIVS 166
            :..|:|:||||:|:|||..|..||:|...::.|||.:.:::...|..|.||..|...|.||||:.
 Frog     1 MEKYKKIRVVGRGAFGIVHLCLRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIE 65

  Fly   167 YLGSFIKDNTLLIEMEYADGGTLAQIIAERQGKLHFPERYIIAVFEQISSAINYMHSENILHRDL 231
            |..:|::|..|:|.||||.|||||:.|.:|...| ..|..|:..|.||..|::::|::.||||||
 Frog    66 YYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSL-LDEDTILHFFVQILLALHHVHTKLILHRDL 129

  Fly   232 KTANVFLNR-RGIVKIGDFGISKIMNTKIHAQTVLGTPYYFSPEMCEGKEYDNKSDIWALGCILG 295
            ||.|:.|:: :.||||||||||||:::|..|.||:|||.|.|||:||||.|:.|||||||||:|.
 Frog   130 KTQNILLDKHQMIVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLY 194

  Fly   296 EMCCLKKTFAASNLSELVTKIMAGNYTPVPSGYTSGLRSLMSNLLQVEAPRRPTASEVLVYWIPL 360
            |:..||:.|.|:||..||.|||:|.:.|:...|:..||.|:.::|.::..:||..:|::.:  |:
 Frog   195 ELTSLKRAFEAANLPALVLKIMSGTFAPISDRYSPELRHLILSMLNLDPSKRPQLNEIMAH--PI 257

  Fly   361 IFRSLGKNKGYSYEDDVGGPGSDQLTAPVPAA-AYSNVSMELELPTAQTETKQLMIADTAAPHEI 424
            ...:|     .:...|:|.....::..|:.:. |.|.|.....:|:|::...:  :..:.|...|
 Frog   258 CIPAL-----LNLYSDIGSVKMRRVEKPLASVPAVSRVRPASRIPSARSRGGR--VGHSPAKPGI 315

  Fly   425 LEKRSVLYQLKAFGTCFSMAPIQLPP-KAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTA 488
            ....|.:|   .:|:..| .|::||. ...:|.|:...:....|.:.|....| |.|....|..:
 Frog   316 PPPLSSVY---TWGSGIS-TPLRLPMLNTEVVQVSAGRTQKAGVTKSGRLIMW-EATPVGTGAPS 375

  Fly   489 L-----EAWKHYPSR-MESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHS 547
            |     .|...:.|| :|......:.....||.||..:|..|.:::.||.::..||.....:...
 Frog   376 LPGSIEHAQPQFISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHANFNDVTQ 440

  Fly   548 PKLIARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTK 612
            ||::..|....:..|:.|..|.:|:|.|..|:.||....|.||||: |:....||::::. .:.:
 Frog   441 PKIVEDLLGYEIVHVSCGASHAIAVSNEKEVFSWGRGDNGRLGLGS-QESYNSPQQVIIP-PEYE 503

  Fly   613 PSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQR---SAKITAFKKVQLPHKVTQ--------- 665
            ..::.||.|:|.:|....:|..||||.:|||||.|   :::.::..:|:..:..|.         
 Frog   504 AQRVVCGIDSSMILTVANQLLACGSNRFNKLGFDRILSASEPSSEDQVEEAYTFTPIQSAPLNQE 568

  Fly   666 ----ACFSSTHSVFLVEGGYVYTMGRNAEGQRGI-RHCNSVDHPTLVDSVKSRYIVKANCSDQCT 725
                |...::||..:...|..||.|.|..||.|. .|.|| ..|.||.:::...:....|.|..|
 Frog   569 AILCADVGTSHSAVVTALGQCYTFGSNQHGQLGTSAHRNS-RVPCLVSALQGVKVTMVACGDAYT 632

  Fly   726 IVASEDNIITVWGTRNGLPG-IGSTNCGLGLQICTPNMELELGNNTAAFTNFLASVYKSELI--- 786
            :....:..:..||  .|..| :|..:.|:|:    |.: ::|..|.:.....:|..:.:.|:   
 Frog   633 VAVGAEGQVFTWG--KGARGRLGRRDEGIGI----PKI-VQLEENHSYVVTSVACCHGNTLLAVK 690

  Fly   787 --LEPVDI 792
              ||.:.:
 Frog   691 PSLEDISV 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 121/255 (47%)
S_TKc 105..354 CDD:214567 121/249 (49%)
ATS1 445..747 CDD:227511 88/326 (27%)
nek8XP_012812229.1 STKc_Nek8 3..258 CDD:270859 122/257 (47%)
S_TKc 4..256 CDD:214567 121/254 (48%)
ATS1 320..657 CDD:227511 93/346 (27%)
RCC1 421..465 CDD:278826 10/43 (23%)
RCC1 470..517 CDD:278826 15/48 (31%)
RCC1 587..635 CDD:278826 17/48 (35%)
RCC1 638..687 CDD:278826 11/55 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 237 1.000 Domainoid score I2285
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H84442
Inparanoid 1 1.050 337 1.000 Inparanoid score I2336
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 1 1.000 - - FOG0000168
OrthoInspector 1 1.000 - - otm48243
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R445
SonicParanoid 1 1.000 - - X891
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.090

Return to query results.
Submit another query.