DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and rcbtb2

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_001004950.1 Gene:rcbtb2 / 448359 XenbaseID:XB-GENE-952598 Length:526 Species:Xenopus tropicalis


Alignment Length:409 Identity:99/409 - (24%)
Similarity:160/409 - (39%) Gaps:66/409 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 VNEDGSAYAWGEGTHGQLGL----TALEAWKHYPSRMESVRNYHVVSACAGDG-FTILVTQAGSL 526
            :.::...:..|..:.|.||.    :.||     |.|::.:....:||...|.| ..::||..|.:
 Frog    36 LTKNDEVFVMGTNSSGCLGTGDAQSILE-----PRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEV 95

  Fly   527 LSCGSNAHLALGQDEQRNYHSP-KLIARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALG 590
            .|.|.||:..||........|| ::...|.:.:...||.|..|.:.|:.:|.||.||.:..|.:|
 Frog    96 YSWGHNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVG 160

  Fly   591 LGNYQQQQKFPQKILLSHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRS------A 649
            .|: ...|..|:|:...........|.||..:|..:..|||::..|.|...:||...|      .
 Frog   161 SGS-TANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPC 224

  Fly   650 KITAFKKVQLPHKVTQACFSSTHSVFLVEGGYVYTMGRNAEGQRGIRHCNSVDHPTLVDSVKSRY 714
            :|.|.:.:    :|.|......|::.|.:.|.:|..|.|:.||.|..:.::..:|..|...|.|.
 Frog   225 RIAALQGI----RVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVDKERI 285

  Fly   715 IVKANCSDQCTIVA-SEDNIITVWGTRNG----LPGIGSTNCGLGLQIC--TPNMELELGNNTAA 772
            :..|.|....|..| |:...:.:||...|    .|.:...:|...:..|  ||.:...|      
 Frog   286 VEIAACHSSHTSAAKSQSGQVYMWGQCRGQSVITPHLTHFSCTDDVFACFSTPAIMWRL------ 344

  Fly   773 FTNFLASVYKSELILEPVDILAL-------FSSKEQCDRGYYVQVHDVYPLAHSVL--------- 821
                        |.:||.|.|.:       |.:....|..:.|....:|  .|.||         
 Frog   345 ------------LSVEPDDHLTVAESLKREFDNPNTADLKFLVDEKYIY--VHKVLLQIRCEHFR 395

  Fly   822 -VLVDTTTPLISSYEGDYP 839
             :|.:....:|...:..||
 Frog   396 SLLHENEEEIIEMNQFSYP 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855
S_TKc 105..354 CDD:214567
ATS1 445..747 CDD:227511 78/296 (26%)
rcbtb2NP_001004950.1 ATS1 <17..269 CDD:227511 65/242 (27%)
RCC1 250..298 CDD:366085 14/47 (30%)
BTB_POZ 349..465 CDD:365784 14/68 (21%)
BACK_RCBTB2 462..526 CDD:350604
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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