DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and Nek6

DIOPT Version :10

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_891998.1 Gene:Nek6 / 360161 RGDID:727779 Length:313 Species:Rattus norvegicus


Alignment Length:300 Identity:103/300 - (34%)
Similarity:159/300 - (53%) Gaps:27/300 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GAASTSLAEAMSSSKAQMPNRQESLLQLSVPRETGVGVAGPELANYEKVRVVGQGSFG----IAI 120
            |.:...|...:..:....|.|..:.|....           .||:::..:.:|:|.|.    ...
  Rat    11 GGSPNHLCHVLGPAHPPDPQRHPNTLSFRC-----------SLADFQIEKKIGRGQFSEVYKATC 64

  Fly   121 LYRRKSDGHQIVFKQINLSE-LSPPGRDLAMNEVDVFSKLHHPNIVSYLGSFIKDNTLLIEMEYA 184
            |..||:    :..|::.:.| :....|...:.|:.:..:|:||||:.||.|||:||.|.|.:|.|
  Rat    65 LLDRKT----VALKKVQIFEMMDAKARQDCVKEIGLLKQLNHPNIIKYLDSFIEDNELNIVLELA 125

  Fly   185 DGGTLAQIIA--ERQGKLHFPERYIIAVFEQISSAINYMHSENILHRDLKTANVFLNRRGIVKIG 247
            |.|.|:|:|.  ::|.:| .|||.:...|.|:.||:.:|||..::|||:|.||||:...||||:|
  Rat   126 DAGDLSQMIKYFKKQKRL-IPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGIVKLG 189

  Fly   248 DFGISKIMNTK-IHAQTVLGTPYYFSPEMCEGKEYDNKSDIWALGCILGEMCCLKKTFAAS--NL 309
            |.|:.:..::: ..|.:::|||||.|||......|:.|||||:|||:|.||..|:..|...  ||
  Rat   190 DLGLGRFFSSETTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL 254

  Fly   310 SELVTKIMAGNYTPVP-SGYTSGLRSLMSNLLQVEAPRRP 348
            ..|..||...:|.|:| ..|:..||.|:|..:..:...||
  Rat   255 FSLCQKIEQCDYPPLPGEHYSEKLRELVSMCIYPDPNHRP 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 95/255 (37%)
ATS1 433..749 CDD:444065
Nek6NP_891998.1 Interaction with ARHGAP33, ANKRA2, CDC42, PRDX3, RAD26L, RBBP6, RPS7 and TRIP4. /evidence=ECO:0000250 1..44 6/43 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 3/19 (16%)
STKc_Nek6_7 44..305 CDD:270863 95/255 (37%)
Interaction with APBB1. /evidence=ECO:0000250 267..270 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.

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