DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment niki and Nek11

DIOPT Version :10

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:XP_008764752.1 Gene:Nek11 / 315978 RGDID:1308801 Length:664 Species:Rattus norvegicus


Alignment Length:353 Identity:120/353 - (33%)
Similarity:181/353 - (51%) Gaps:34/353 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 TGVGVAGPEL--ANYEKVRVVGQGSFGIAILY--RRKSDGHQI-VFKQINLSELSPPGRDLAMNE 152
            |.:.|..|.:  ..|...:.:|.||||...|.  ::...|.:: |.|:|::.||:|.....|..|
  Rat    13 TAIPVYPPTVIARRYVLQQKLGSGSFGTVYLVSDKKAKHGEELKVLKEISVGELNPNESVQASME 77

  Fly   153 VDVFSKLHHPNIVSYLGSFIKDNTLLIEMEYADGGTLAQIIAE--RQGKLHFPERYIIAVFEQIS 215
            ..:.|.|:||.||.:..||::..|..|..||.:|..|...|.|  ..||: ||:..|:..|.|:.
  Rat    78 AQLLSTLNHPAIVRFHESFMEQGTFCIITEYCEGRDLDYKIQEYKEAGKI-FPDNQIVEWFIQLL 141

  Fly   216 SAINYMHSENILHRDLKTANVFLNRRGIVKIGDFGISK-IMNTKIHAQTVLGTPYYFSPEMCEGK 279
            ..::|||...|||||||:.|:|| :..:.||||||:|: :|.:...|.|:.|||||.|||..:.:
  Rat   142 LGVDYMHERRILHRDLKSKNIFL-KNNLPKIGDFGVSRLLMGSCELATTLTGTPYYMSPEALKHQ 205

  Fly   280 EYDNKSDIWALGCILGEMCCLKKTFAASNLSELVTKIMAGNYTPVPSGYTSGLRSLMSNLLQVEA 344
            ..|.|||||:|.|||.||||:...|:.||...:|..|:.||...:|..|...|..:||.:|....
  Rat   206 GCDAKSDIWSLACILYEMCCMDHAFSGSNFLSVVLNIVEGNTPSLPDRYPRELNIIMSRMLNKSP 270

  Fly   345 PRRPTASEVL--VYWIPLIFRSLGKNKGYSYEDDVGGPGSDQLTAPVPAAAYSNVSMELEL---- 403
            ..||:|:|:|  .|....:.:.:.|:...:.||       .:.:|....||::..:|:.|:    
  Rat   271 SLRPSAAEILKAPYVEERLQQLMYKHPEATLED-------KRNSACQKEAAHAVNAMQREIYLQT 328

  Fly   404 -----------PTAQTETKQLMIADTAA 420
                       ||.:...::|..||..|
  Rat   329 LRALCVVQKITPTERVWPRKLQAADERA 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 103/262 (39%)
ATS1 433..749 CDD:444065
Nek11XP_008764752.1 STKc_Nek11 26..285 CDD:270861 102/260 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.