DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and Stkld1

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_001382673.1 Gene:Stkld1 / 311825 RGDID:1307355 Length:674 Species:Rattus norvegicus


Alignment Length:695 Identity:129/695 - (18%)
Similarity:250/695 - (35%) Gaps:192/695 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LANYEKVRVVGQGSFGIAILYRRKSDGHQIVFKQINLSELSPPGRDLAMNEVDVFSKLHHPNIVS 166
            :..|:.::.:..|:.|:.::........:.:.||:..  :.....:.|:.|:....||.|.||..
  Rat     1 MEKYQILQKLSPGALGVNLVVEELETETKYLIKQVEC--IDEHHANKALEELMPLMKLQHSNISV 63

  Fly   167 YLGSFIK-DNT-----LLIEMEYADGGTLAQIIA-ERQGKLHFPERYIIAVFEQISSAINYMHSE 224
            |...||. ||.     |.:.|:|.:..||..|:. :|:.|......::..:..|:..||.|:|..
  Rat    64 YHEMFIMWDNEISSLFLCLVMDYYNQVTLQNIMENKRKIKEVVDTEWMHTILSQVLDAIQYLHEL 128

  Fly   225 NILHRDLKTANVFLNRRGIVKIGDFGISKIMNTK----IHAQTVLGTPYYFSPEMCEGKEYDNKS 285
            ||:||:||.:|:.:......|:.|.....:|..:    :.|:.......:.:||..: ..:..||
  Rat   129 NIVHRNLKPSNIIVINNSYCKLQDLSSQALMTHEAKWNVRAEEDPCQKSWMAPETLK-FSFSIKS 192

  Fly   286 DIWALGCILGEM--CCLKKTFAASNLSELVTKIMAGNYTPVPSGYTSGLRSLMSNLLQVEAPRRP 348
            |||:||||:.:|  |.......|.:|.:.:..            :...|:.::..:.:.|.|...
  Rat   193 DIWSLGCIILDMATCSFLNDAEAMHLRKSIRH------------HPGSLKPILKTMEEKEIPGTD 245

  Fly   349 TASEVLVYWIPLIFRSLGKNKGYSYEDDVGGPGSDQLT------APVPAAAYSNVSMELELPTAQ 407
                  ||::.|.| .|..|.            ||:|:      ..|.:.:|....:.|.:   |
  Rat   246 ------VYYLLLPF-MLHINP------------SDRLSIKDVIHVTVMSNSYMTSCVALNM---Q 288

  Fly   408 TETKQLMIADTAAPHEILEKRSVL--------YQLKAFGTCFSMAPIQL----PPKAV------- 453
            .:...:.|.|......:.....|:        .||:|.....:|...||    |.:.|       
  Rat   289 RQVVPIFITDVLLEGNMANILDVMQNFSHRPEVQLRALNKLLTMPEDQLGLPWPTELVEEVITII 353

  Fly   454 -----IVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTAL------EAWKHYPSRMESVRNYHV 507
                 ::|:.:| :..:::...|.|.|  ..:..::..::|      .|.:.:|:          
  Rat   354 KQHEKVLDILLS-ACSLLLRVLGQALA--HDSEAEIPKSSLITSFLMNALQSHPN---------- 405

  Fly   508 VSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYH-SPKLIARLADVR------------- 558
                 .:|..::.....|::|  |...::...:|:|.:. :.|.:.|..:.|             
  Rat   406 -----SEGLVLVTYNVLSIIS--SQGQISEELEEKRLFELAQKHLERFQEDRDICLGILSLLWSL 463

  Fly   559 -----------VEQVAAGLQHVLALSRE-------GAVYVWGTSTCGALGLGNYQQQQKFPQKIL 605
                       :|.::..:..|||..:|       |...:|..|..|.:..|.::|    ...:|
  Rat   464 LVDVDTVNKEPLENLSVSVTWVLAFHQEDMEVTEAGCAVLWLLSLMGCIKEGQFEQ----VVVLL 524

  Fly   606 LSHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQLPHKVTQACFSS 670
            |..::..|.:         ||..|..|....|       ..:.:::.||:.|.|           
  Rat   525 LRSIQLCPGR---------VLLVNNALRGLAS-------LAKVSELVAFRTVVL----------- 562

  Fly   671 THSVFLVEGGYVYTMGRNAEGQRGIRHCNSV-----DHPTLVDSV 710
                              .||..|:.....:     |.|.:|:::
  Rat   563 ------------------EEGSSGLHLVQDIYQLYKDDPEVVENI 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 61/267 (23%)
S_TKc 105..354 CDD:214567 59/261 (23%)
ATS1 445..747 CDD:227511 50/325 (15%)
Stkld1NP_001382673.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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