DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and Nek1

DIOPT Version :10

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:XP_038950287.1 Gene:Nek1 / 290705 RGDID:1309375 Length:1261 Species:Rattus norvegicus


Alignment Length:254 Identity:112/254 - (44%)
Similarity:168/254 - (66%) Gaps:2/254 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LANYEKVRVVGQGSFGIAILYRRKSDGHQIVFKQINLSELSPPGRDLAMNEVDVFSKLHHPNIVS 166
            :..|.:::.:|:||||.|:|.:...||...|.|:||:|.:|...|:.:..||.|.:.:.|||||.
  Rat     1 MEKYVRLQKIGEGSFGKAVLVKSTEDGRHYVIKEINISRMSDKEREESRREVAVLANMKHPNIVQ 65

  Fly   167 YLGSFIKDNTLLIEMEYADGGTLAQIIAERQGKLHFPERYIIAVFEQISSAINYMHSENILHRDL 231
            |..||.::.:|.|.|:|.:||.|.:.|..::|.| |.|..|:..|.||..|:.::|...|||||:
  Rat    66 YKESFEENGSLYIVMDYCEGGDLFKRINAQKGTL-FQEDQILDWFVQICLALKHVHDRKILHRDI 129

  Fly   232 KTANVFLNRRGIVKIGDFGISKIMNTKIH-AQTVLGTPYYFSPEMCEGKEYDNKSDIWALGCILG 295
            |:.|:||.:.|.|::|||||::::|:.:. |:|.:|||||.|||:||.|.|:||||||||||:|.
  Rat   130 KSQNIFLTKDGTVQLGDFGIARVLNSTVELARTCIGTPYYLSPEICENKPYNNKSDIWALGCVLY 194

  Fly   296 EMCCLKKTFAASNLSELVTKIMAGNYTPVPSGYTSGLRSLMSNLLQVEAPRRPTASEVL 354
            |:|.||..|.|.|:..||.||::|::.||...|:..||||:|.|.:.....||:.:.:|
  Rat   195 ELCTLKHAFEAGNMKNLVLKIISGSFPPVSLHYSYDLRSLLSQLFKRNPRDRPSVNSIL 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 112/252 (44%)
ATS1 433..749 CDD:444065
Nek1XP_038950287.1 STKc_Nek1 3..258 CDD:270858 112/252 (44%)
Blue background indicates that the domain is not in the aligned region.

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