DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and Nek8

DIOPT Version :10

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_001099274.1 Gene:Nek8 / 287473 RGDID:1306897 Length:698 Species:Rattus norvegicus


Alignment Length:700 Identity:230/700 - (32%)
Similarity:336/700 - (48%) Gaps:119/700 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LANYEKVRVVGQGSFGIAILYRRKSDGHQIVFKQINLSELSPPGRDLAMNEVDVFSKLHHPNIVS 166
            :..||::||||:|:|||..|..||:|...::.|||.:.:::...|..|.||..|...|:|||::.
  Rat     1 MEKYERIRVVGRGAFGIVHLCLRKADQKLVIIKQIPVEQMTKEERQAAQNECQVLKLLNHPNVIE 65

  Fly   167 YLGSFIKDNTLLIEMEYADGGTLAQIIAERQGKLHFPERYIIAVFEQISSAINYMHSENILHRDL 231
            |..:|::|..|:|.||||.|||||:.|.:|...| ..|..|:..|.||..|::::|:..||||||
  Rat    66 YYENFLEDKALMIAMEYAPGGTLAEFIQKRCNSL-LEEETILHFFVQILLALHHVHTHLILHRDL 129

  Fly   232 KTANVFLNR-RGIVKIGDFGISKIMNTKIHAQTVLGTPYYFSPEMCEGKEYDNKSDIWALGCILG 295
            ||.|:.|:: |.:|||||||||||:::|..|.||:|||.|.|||:||||.|:.|||||||||:|.
  Rat   130 KTQNILLDKHRMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLY 194

  Fly   296 EMCCLKKTFAASNLSELVTKIMAGNYTPVPSGYTSGLRSLMSNLLQVEAPRRPTASEVLVYWIPL 360
            |:..||:.|.|:||..||.|||:|.:.|:...|:..||.|:.:||.:|..:||..|.::..  ||
  Rat   195 ELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPELRQLVLSLLSLEPAQRPPLSHIMAQ--PL 257

  Fly   361 IFRSLGKNKGYSYEDDVG-----------------GPGSDQLTA-----------------PVP- 390
            ..|:|     .:...|||                 .|||....|                 |.| 
  Rat   258 CIRAL-----LNIHTDVGSVRMRRAEKCLTPGTPMAPGSTGSRATSARCRGVPRGPVRPAIPPPL 317

  Fly   391 AAAYS---NVSMELELPTAQTETKQLMIADTAAPHEILEKRSVLYQLKAFGT---CFSMAPIQLP 449
            ::.|:   .:|:.|.||...||..|:....|.........|.:|::....||   ......::||
  Rat   318 SSVYAWGGGLSIPLRLPMPNTEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELP 382

  Fly   450 -PKAVIVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAG 513
             |:.|        |.|:               .||.|:|.    ||.              || |
  Rat   383 QPQFV--------SRFL---------------EGQSGVTI----KHV--------------AC-G 405

  Fly   514 DGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALSREGAV 578
            |.||..:|..|.:::.||.::..||.....:...|.::..|....:.|||.|..||||||.:|.:
  Rat   406 DLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSADGEL 470

  Fly   579 YVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKL 643
            :.||....|.||||. ::....||::.:...: :..::.||.|.|.:|.:.|.:..||||.:|||
  Rat   471 FAWGRGDGGRLGLGT-RESHNCPQQVPMVPGQ-EAQRVVCGIDCSMILTSPGRVLACGSNRFNKL 533

  Fly   644 GFQRSAKITAFKKVQLPHKVTQACFSST--------------------HSVFLVEGGYVYTMGRN 688
            |..    ..:.::..:||:..:...|.|                    ||..:...|..||.|.|
  Rat   534 GLD----CLSLEEEPVPHQQVEEALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSN 594

  Fly   689 AEGQRGIRHCNSVDHPTLVDSVKSRYIVKANCSDQCTIVASEDNIITVWG 738
            ..||.|.........|..|..::...:|...|.|..|:....:..:..||
  Rat   595 QHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAIGAEGEVYSWG 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 122/255 (48%)
ATS1 433..749 CDD:444065 83/329 (25%)
Nek8NP_001099274.1 STKc_Nek8 3..258 CDD:270859 123/257 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..307 4/25 (16%)
ATS1 401..>690 CDD:444065 70/264 (27%)
RCC1 1 415..466 16/50 (32%)
RCC1 2 467..518 15/52 (29%)
RCC1 3 520..571 13/54 (24%)
RCC1 4 585..636 14/50 (28%)
RCC1 5 638..689 1/6 (17%)

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