DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment niki and Nek3

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_001156419.1 Gene:Nek3 / 23954 MGIID:1344371 Length:511 Species:Mus musculus


Alignment Length:488 Identity:143/488 - (29%)
Similarity:215/488 - (44%) Gaps:112/488 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 NYEKVRVVGQGSFGIAILYRRKSDGHQIVFKQINLSELSPPGRDLAMNEVDVFSKLHHPNIVSYL 168
            ||..:||:||||||.|:|..::|.......|:|.|.:   .....:..|..:.:|:.|||||::.
Mouse     3 NYTVLRVIGQGSFGRALLVLQESSNQTFAMKEIRLLK---SDTQTSRKEAVLLAKMKHPNIVAFK 64

  Fly   169 GSFIKDNTLLIEMEYADGGTLAQIIAERQGKLHFPERYIIAVFEQISSAINYMHSENILHRDLKT 233
            .||..:..|.|.|||.|||.|.|.|.:::||| |||..|:..|.||...:|::|...:||||:|:
Mouse    65 ESFEAEGYLYIVMEYCDGGDLMQRIKQQKGKL-FPEDTILNWFIQICLGVNHIHKRRVLHRDIKS 128

  Fly   234 ANVFLNRRGIVKIGDFGISKIMNTKI-HAQTVLGTPYYFSPEMCEGKEYDNKSDIWALGCILGEM 297
            .||||...|.||:||||.::::::.: .|.|.:|||||..||:.|...|:||||||:|||||.|:
Mouse   129 KNVFLTHNGKVKLGDFGSARLLSSPMAFACTYVGTPYYVPPEIWENLPYNNKSDIWSLGCILYEL 193

  Fly   298 CCLKKTFAASNLSELVTKIMAGNYTPVPSGYTSGLRSLMSNLLQVEAPRRPTASEVLVYWI---- 358
            |.||..|.|::...|:.||..|...|:|:.|:..|:.|:..:|:.....||:|:.:|....    
Mouse   194 CALKHPFQANSWKNLILKICQGPIHPLPALYSCKLQGLVKQMLKRNPSHRPSATTLLCRGSLAPL 258

  Fly   359 ------PLIFRSLGK-----------------------------NKGYSYEDDVGGPGSD---QL 385
                  |.|.|..|:                             |.....|::.|...|.   :.
Mouse   259 VPKCLPPQIIREYGEQILDEIKISTPKNMKKQDSNRVRRALGEANSASMQEEERGRKCSHTELES 323

  Fly   386 TAPVPA------AAYSNVSMELELPTAQTETKQLMIADTAAPH-------------EILEKRSVL 431
            |...||      ||..|       |.:....:.......|:||             |.|||.|:|
Mouse   324 TGTTPAGNALERAARGN-------PESGNPQEHGRHTSPASPHRPWWERHGPSSNVEALEKASIL 381

  Fly   432 ----------------YQLKAFGTCFSMAPIQLPPKAVI-----VDVAMSDSHFVVVNEDGSAYA 475
                            |:..|     ....::.||:|::     .|::.:...:.:.......:.
Mouse   382 TSSFTAEDDRGGSVIKYEENA-----RRQWVREPPEALLSMLKDADLSQAFQTYTIYRPGAEGFL 441

  Fly   476 WG--------EGTHGQLGLTALEAWKHYPSRME 500
            .|        :...|.|....|:     |.|.|
Mouse   442 KGPLSEDTASDSVDGDLDSVMLD-----PERFE 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 106/265 (40%)
S_TKc 105..354 CDD:214567 104/249 (42%)
ATS1 445..747 CDD:227511 11/69 (16%)
Nek3NP_001156419.1 Interaction with VAV2. /evidence=ECO:0000250 1..282 110/282 (39%)
PKc_like 3..255 CDD:389743 106/255 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 299..370 14/77 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 443..511 7/32 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0589
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D132059at33208
OrthoFinder 1 1.000 - - FOG0000168
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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