DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and nekl-3

DIOPT Version :9

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_510080.2 Gene:nekl-3 / 181398 WormBaseID:WBGene00008956 Length:302 Species:Caenorhabditis elegans


Alignment Length:298 Identity:105/298 - (35%)
Similarity:166/298 - (55%) Gaps:30/298 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 ELANYEKVRVVGQGSFGIAILYRRKS---DGHQIVFKQINLSEL-SPPGRDLAMNEVDVFSKLHH 161
            ||...||  .:|:|.|  :.::|.:.   |.| :..|:|.:.|: ....|...:.|:|:..:|:|
 Worm    21 ELFIIEK--KIGKGQF--SEVFRAQCTWVDLH-VALKKIQVFEMVDQKARQDCLKEIDLLKQLNH 80

  Fly   162 PNIVSYLGSFIKDNTLLIEMEYADGGTLAQIIA--ERQGKLHFPERYIIAVFEQISSAINYMHSE 224
            .|::.|..|||.:|.|.|.:|.|:.|.::::|.  ::.|:| .||:.|...|.|::.|:.:|||:
 Worm    81 VNVIRYYASFIDNNQLNIVLELAEAGDMSRMIKHFKKGGRL-IPEKTIWKYFVQLARALAHMHSK 144

  Fly   225 NILHRDLKTANVFLNRRGIVKIGDFGISKIMNTK-IHAQTVLGTPYYFSPEMCEGKEYDNKSDIW 288
            .|:|||:|.||||:...||||:||.|:.:..::| ..|.:::|||||.|||..:...|:.|||:|
 Worm   145 RIMHRDIKPANVFITGNGIVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIQESGYNFKSDLW 209

  Fly   289 ALGCILGEMCCLKKTFAAS--NLSELVTKIMAGNYTPVPSG-YTSGLRSLMSNLLQVEAPRRPTA 350
            :.||:|.||..|:..|...  ||..|..||....|.|:|:. |::.||.|:|..:..||.:||..
 Worm   210 STGCLLYEMAALQSPFYGDKMNLYSLCKKIENCEYPPLPADIYSTQLRDLVSRCILPEASKRPET 274

  Fly   351 SEVLVYWIPLIFRSLGKNKGYSYEDDVGGPGSDQLTAP 388
            ||||              :...:.::...|..||.|.|
 Worm   275 SEVL--------------QVAEHMNNYFSPSGDQSTTP 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 98/264 (37%)
S_TKc 105..354 CDD:214567 96/258 (37%)
ATS1 445..747 CDD:227511
nekl-3NP_510080.2 STKc_Nek6_7 23..283 CDD:270863 98/279 (35%)
S_TKc 23..279 CDD:214567 98/275 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000168
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R445
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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