DRSC/TRiP Functional Genomics Resources

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Protein Alignment niki and nekl-3

DIOPT Version :10

Sequence 1:NP_651293.1 Gene:niki / 42959 FlyBaseID:FBgn0045980 Length:841 Species:Drosophila melanogaster
Sequence 2:NP_510080.2 Gene:nekl-3 / 181398 WormBaseID:WBGene00008956 Length:302 Species:Caenorhabditis elegans


Alignment Length:298 Identity:105/298 - (35%)
Similarity:166/298 - (55%) Gaps:30/298 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 ELANYEKVRVVGQGSFGIAILYRRKS---DGHQIVFKQINLSEL-SPPGRDLAMNEVDVFSKLHH 161
            ||...||  .:|:|.|  :.::|.:.   |.| :..|:|.:.|: ....|...:.|:|:..:|:|
 Worm    21 ELFIIEK--KIGKGQF--SEVFRAQCTWVDLH-VALKKIQVFEMVDQKARQDCLKEIDLLKQLNH 80

  Fly   162 PNIVSYLGSFIKDNTLLIEMEYADGGTLAQIIA--ERQGKLHFPERYIIAVFEQISSAINYMHSE 224
            .|::.|..|||.:|.|.|.:|.|:.|.::::|.  ::.|:| .||:.|...|.|::.|:.:|||:
 Worm    81 VNVIRYYASFIDNNQLNIVLELAEAGDMSRMIKHFKKGGRL-IPEKTIWKYFVQLARALAHMHSK 144

  Fly   225 NILHRDLKTANVFLNRRGIVKIGDFGISKIMNTK-IHAQTVLGTPYYFSPEMCEGKEYDNKSDIW 288
            .|:|||:|.||||:...||||:||.|:.:..::| ..|.:::|||||.|||..:...|:.|||:|
 Worm   145 RIMHRDIKPANVFITGNGIVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIQESGYNFKSDLW 209

  Fly   289 ALGCILGEMCCLKKTFAAS--NLSELVTKIMAGNYTPVPSG-YTSGLRSLMSNLLQVEAPRRPTA 350
            :.||:|.||..|:..|...  ||..|..||....|.|:|:. |::.||.|:|..:..||.:||..
 Worm   210 STGCLLYEMAALQSPFYGDKMNLYSLCKKIENCEYPPLPADIYSTQLRDLVSRCILPEASKRPET 274

  Fly   351 SEVLVYWIPLIFRSLGKNKGYSYEDDVGGPGSDQLTAP 388
            ||||              :...:.::...|..||.|.|
 Worm   275 SEVL--------------QVAEHMNNYFSPSGDQSTTP 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nikiNP_651293.1 STKc_Nek 104..359 CDD:270855 98/264 (37%)
ATS1 433..749 CDD:444065
nekl-3NP_510080.2 STKc_Nek6_7 23..283 CDD:270863 98/279 (35%)
Blue background indicates that the domain is not in the aligned region.

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