DRSC/TRiP Functional Genomics Resources

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Protein Alignment Saf-B and IST3

DIOPT Version :10

Sequence 1:NP_733041.2 Gene:Saf-B / 42958 FlyBaseID:FBgn0039229 Length:928 Species:Drosophila melanogaster
Sequence 2:NP_012270.1 Gene:IST3 / 854821 SGDID:S000001444 Length:148 Species:Saccharomyces cerevisiae


Alignment Length:106 Identity:17/106 - (16%)
Similarity:42/106 - (39%) Gaps:15/106 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 LWVSGLSTLTRASDLKAIFSKFGKVIGAKVVTNTRTPGTRCYGYVTMSSSADASRCIENLHRTEL 378
            :::..|:......|:..:||::|..:...:..:..|..::.:.|:...........::||:..::
Yeast    33 IYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTILAVDNLNGFKI 97

  Fly   379 HGRIISVERT---------------KNEIGGSLNSKEGKGK 404
            .||.:.::.|               |.|:...:.||....|
Yeast    98 GGRALKIDHTFYRPKRSLQKYYEAVKEELDRDIVSKNNAEK 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Saf-BNP_733041.2 SAP 11..42 CDD:460424
2A1904 <16..>270 CDD:273344
RRM_SF 311..386 CDD:473069 11/71 (15%)
SWIRM-assoc_1 <588..618 CDD:465142
IST3NP_012270.1 RRM_ist3_like 22..109 CDD:409845 12/75 (16%)
Blue background indicates that the domain is not in the aligned region.

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