DRSC/TRiP Functional Genomics Resources

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Protein Alignment Saf-B and SRSF4

DIOPT Version :10

Sequence 1:NP_733041.2 Gene:Saf-B / 42958 FlyBaseID:FBgn0039229 Length:928 Species:Drosophila melanogaster
Sequence 2:NP_005617.2 Gene:SRSF4 / 6429 HGNCID:10786 Length:494 Species:Homo sapiens


Alignment Length:564 Identity:140/564 - (24%)
Similarity:203/564 - (35%) Gaps:165/564 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 GSGSSAGNGTGANSNNKQATLSR---NLWVSGLSTLTRASDLKAIFSKFGKVIGAKVVTNTRTPG 351
            |||.| |.|...:..:|....:|   .|.|..||:.....|||....:.|:|..|..     ..|
Human    80 GSGRS-GYGYRRSGRDKYGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADA-----HKG 138

  Fly   352 TRCYGYVTMSSSADASRCIENLHRTELHGRIISVERTKNEIGGSLNSKEGKGKAPGDAGNKKKED 416
            .:..|.:...|.:|..|.:|.|..||::||.|.:...|                   .|::::. 
Human   139 RKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDK-------------------PGSRRRR- 183

  Fly   417 DSGKKSGSGKGSSSNSGDDKKGGDGNGDSKSVGGDLKRDGKESNRARSRRND-DRGKSLA-SQDR 479
             |..:|.|...|.|.|...:|....:|.|||        ....:|:|||... .|.||.: ||.|
Human   184 -SYSRSRSHSRSRSRSRHSRKSRSRSGSSKS--------SHSKSRSRSRSGSRSRSKSRSRSQSR 239

  Fly   480 PRHDRERSAKGSQDHRSGRNPRDVDREIQQRQRERERRQREMLSYQKIREERERQRLRERER--- 541
            .|..:|:|          |:|        .:::.|.|......|..|.:::.| ::::..:.   
Human   240 SRSKKEKS----------RSP--------SKEKSRSRSHSAGKSRSKSKDQAE-EKIQNNDNVGK 285

  Fly   542 -ELREEERRRREARERQRIEEERLQEERRKLAVERERLEREKAELLRMERERQKLEREKIELERL 605
             :.|...|.:.:::.|.|.:|.|::||:|. :|.|.| .:||:  ||..|.|             
Human   286 PKSRSPSRHKSKSKSRSRSQERRVEEEKRG-SVSRGR-SQEKS--LRQSRSR------------- 333

  Fly   606 ELKRQQMKIMESRDDPG----KRGVSKRADDRYGDVTDRKRTAIFDAPPPPRFDTNLVSSRSTYD 666
                       ||...|    .|..||..|.|.|    |||:         |.::.   |||.  
Human   334 -----------SRSKGGSRSRSRSRSKSKDKRKG----RKRS---------REESR---SRSR-- 369

  Fly   667 KKHDDYGSSSSTKRVLDDYSSSSKRLDYSSKRNDYSSSSGSKRGAVDDYTAVPTKRSNDYSASSS 731
                   |.|.::|       |.||   .|||:..:.||..|:           |...|.|.|.|
Human   370 -------SRSKSER-------SRKR---GSKRDSKAGSSKKKK-----------KEDTDRSQSRS 406

  Fly   732 SKRDDYKRDEVRHLPLSGTVGGGSSSSYLHKNNTAGGGAGSYVHKNNTSGTGGRYNDSDRSNTSS 796
            ..|...|..|......|...|.|.|.:           ||:    |..:.:..|.|...:.|..|
Human   407 PSRSVSKEREHAKSESSQREGRGESEN-----------AGT----NQETRSRSRSNSKSKPNLPS 456

  Fly   797 YRRDDSHSLGNKRYDNSSGGGGAYGSSSNSVNIWAPSSGGSSSH 840
            ..|..|.|....|..:.|....|..|         ||...|.||
Human   457 ESRSRSKSASKTRSRSKSRSRSASRS---------PSRSRSRSH 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Saf-BNP_733041.2 SAP 11..42 CDD:460424
2A1904 <16..>270 CDD:273344
RRM_SF 311..386 CDD:473069 23/77 (30%)
SWIRM-assoc_1 <588..618 CDD:465142 2/29 (7%)
SRSF4NP_005617.2 RRM1_SRSF4 1..87 CDD:410007 5/7 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..95 6/15 (40%)
RRM2_SRSF4_like 104..175 CDD:410012 22/75 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..494 111/469 (24%)
Blue background indicates that the domain is not in the aligned region.

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