DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Saf-B and Safb

DIOPT Version :9

Sequence 1:NP_733041.2 Gene:Saf-B / 42958 FlyBaseID:FBgn0039229 Length:928 Species:Drosophila melanogaster
Sequence 2:XP_017452111.1 Gene:Safb / 64196 RGDID:620613 Length:942 Species:Rattus norvegicus


Alignment Length:1041 Identity:286/1041 - (27%)
Similarity:442/1041 - (42%) Gaps:275/1041 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EAG-KKIAELRVCDLKSELEKRELETVGPKAVLIERLEKSLRAEGLDPATHLIVPGAKAKKPFAM 66
            |.| :::::|||.||::||.||.|::.|.|:||:|||:|::..||.:|....::.....|.| ..
  Rat    25 ETGTRRLSDLRVIDLRAELRKRNLDSSGNKSVLMERLKKAIEEEGGNPDEIEVISEGNKKMP-KR 88

  Fly    67 PMKDLQSEVVIKEEPIDANE-EEVKVEQQDDYQNGNDYSHHADDDGHEIDQVGDVD-DECVILDD 129
            |.|..:.|    :|.::.|. ||...:.|:|.:  ....:..|.|..:|..:.:.| |...:.|.
  Rat    89 PSKGKKPE----DEGVEDNGLEENSGDGQEDVE--TSLENLQDMDMMDISVLDEADIDNGSVADC 147

  Fly   130 DDEEDEDHVYD---DEPQSGDGDAEGKAQDDGAENNGDDKAIIHGEEENTGDTGNMDNDESINL- 190
            .:||:|..:.:   |..:..:||::| ..:...|:..|||..|:..:.::.|...:...|..:| 
  Rat   148 VEEEEEATLPEGLGDSTELVEGDSKG-LPEQLQEHAIDDKEAINNVDTSSSDFTILQEMEEASLE 211

  Fly   191 --------TIGED-EQKLLHDEASD-----DKSIKSVKPANK-------SEKSNSKDADKKNDDG 234
                    .:||. :.:.:.:|.|:     .::..||.|..|       .|.....:.:::.::.
  Rat   212 PENEKILDILGETCKSEPVKEEGSELEQPFAQATSSVGPDRKLAEEEDLFESCGHPEEEEEEEEE 276

  Fly   235 ARSKKRDEKSGDKKDSSEQKSSGKSS----NQKDD-----KEKSTAAPGGAT------------- 277
            ...::..|:.||...:|..||...|:    ::.|.     |.:...||||.|             
  Rat   277 EEQEEEQEEEGDLALASSSKSESSSTRCQWSEADALLAVVKREPAEAPGGGTGMDREPVGLEEPV 341

  Fly   278 --SSTAS--------------SAAGS----------------------KSGSGSSAGNGTGA--- 301
              ||||:              :||.|                      .:...|||..|...   
  Rat   342 EQSSTAAQLPETTSQELVRAPTAAPSPEPRDSKDDVKKFAFDACNDVPAAPKESSASEGADQKMS 406

  Fly   302 ----NSNNK--------QATLSRNLWVSGLSTLTRASDLKAIFSKFGKVIGAKVVTNTRTPGTRC 354
                :|:.|        :::..||.||||||:.|||:|||.:||::|||:|||||||.|:||.||
  Rat   407 SVEDDSDTKRLSREEKGRSSCGRNFWVSGLSSTTRATDLKNLFSRYGKVVGAKVVTNARSPGARC 471

  Fly   355 YGYVTMSSSADASRCIENLHRTELHGRIISVERTKNEIGGSL-------NSKEGKGKAPGDAGNK 412
            ||:||||::.:|::||.:||:|||||::||||:.|:|..|..       :||:.|......:.|.
  Rat   472 YGFVTMSTAEEATKCINHLHKTELHGKMISVEKAKSEPAGKRVPDRRDGDSKKEKTSTSDRSANL 536

  Fly   413 KKED-----DSGKKSGSGKGSSSNSGDDKKGGDGNGDSKSVGGDLKRDGKESNRARSRRNDDRG- 471
            |:|:     |..||:..|....|...||:|.|                  .|.|:|:.::..|| 
  Rat   537 KREEKGDRKDDAKKTDDGSTEKSKDADDQKPG------------------PSERSRTTKSGSRGT 583

  Fly   472 KSLASQDRPR----------HDRERSAKGSQDHRSGRNPRDVDREIQQRQRERERRQREMLSYQK 526
            :.....|:.:          ..:||::| |||.:|      |.||           :|.::|:.|
  Rat   584 ERTVVMDKSKGVPVISVKTSGSKERASK-SQDRKS------VSRE-----------KRSVVSFDK 630

  Fly   527 IRE---ERERQRLRERERELREEERRRREARERQRIEEERLQEERRKLAVERERLEREKAELLRM 588
            ::|   .|:.:..||||||..|.|:|.:...||:  |.|||:..|.:||..|.|||||:.|..|:
  Rat   631 VKESRKSRDSESRRERERERSEREQRLQAQWERE--ERERLEIARERLAFHRHRLERERMERERL 693

  Fly   589 ERER------QKLEREKIELERLELKRQQMKIMESRDDPGKR---GVSKRADDRYGDVTDRKRTA 644
            ||||      ::.|:|:|..||.||:|||....|....|..|   .|..|.||.|.  .:.||.|
  Rat   694 ERERMHVEQERRREQERIHREREELRRQQELRYEQERRPAVRRPYEVDGRRDDAYW--PEAKRAA 756

  Fly   645 IFDAPPPPRFDTNLVSSRSTYDKKHDDYGSSSSTKRVLDDYSSSSKRLDYSSKRNDYS-SSSGSK 708
            :.|     |:.::.    |..|:.||            .|:....:..::|..|.:.| |..|.:
  Rat   757 LDD-----RYHSDF----SRQDRFHD------------FDHRDRGRYPNHSVDRREGSRSMMGDR 800

  Fly   709 RGA-VDDYTAVPTKRSNDYSASSSSKRDDYKRDEVRHLPLSGTVGGGSSSSYLHKNNTAGGGAGS 772
            .|. ..:....|.:...|       .||.:              |.||     :|..:.|.|...
  Rat   801 EGQHYPERHGGPERHGRD-------SRDGW--------------GYGS-----NKRLSEGRGLPP 839

  Fly   773 YVHKNNTSGTGGRYNDSDR-----SNTSSYRRDDSHSLGNKRYDNSSGG-------GGAYGSSSN 825
            ........|..||..:.||     ::.....||.....|.:|..:...|       ||..|..| 
  Rat   840 PPRGRRDWGEHGRRLEDDRAWQGTADGGMMERDHKRWQGGERSMSGHSGPGHMMNRGGMSGRGS- 903

  Fly   826 SVNIWAPSSGGSSSHLGSGGGGGNQIKSYGNNGMSSNMHSTNSWQKSAPVDDNGWRQVPARFDRG 890
                :|| .|.|..|:...||     ...|..|.|                 .|.|...|||.|.
  Rat   904 ----FAP-GGASRGHVIPRGG-----MQAGFGGQS-----------------RGSRPSDARFTRR 941

  Fly   891 Y 891
            |
  Rat   942 Y 942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Saf-BNP_733041.2 SAP 11..42 CDD:280251 18/30 (60%)
RRM 205..>394 CDD:223796 86/275 (31%)
RRM_SAFB_like 313..386 CDD:240863 48/72 (67%)
SWIRM-assoc_1 <588..618 CDD:293104 15/35 (43%)
SafbXP_017452111.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337521
Domainoid 1 1.000 113 1.000 Domainoid score I5974
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 294 1.000 Inparanoid score I2672
OMA 1 1.010 - - QHG46608
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005622
OrthoInspector 1 1.000 - - otm45291
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR15683
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1802
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.000

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