DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Saf-B and Safb2

DIOPT Version :10

Sequence 1:NP_733041.2 Gene:Saf-B / 42958 FlyBaseID:FBgn0039229 Length:928 Species:Drosophila melanogaster
Sequence 2:XP_006524220.1 Gene:Safb2 / 224902 MGIID:2146808 Length:1017 Species:Mus musculus


Alignment Length:988 Identity:285/988 - (28%)
Similarity:411/988 - (41%) Gaps:270/988 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EAG-KKIAELRVCDLKSELEKRELETVGPKAVLIERLEKSLRAEGLDPATHLIVPGAKAKKPFAM 66
            |:| :::::|||.||::||:||.|:|.|.|:||:|||.|:.:.||.:|....|..||.:|:....
Mouse    91 ESGTRRLSDLRVIDLRAELKKRNLDTGGNKSVLMERLRKAFKEEGQEPEEVGISWGAVSKRAVKR 155

  Fly    67 PMKDLQSEVVIKEEPIDAN--EEEVKVEQ---------QD---------DYQNGNDYS------- 104
            ..|..:.|    ||..:.|  ||:.:..|         ||         |.....|.|       
Mouse   156 NTKGSKME----EEGSEDNGLEEDSRYGQDGVVILQSSQDRDTMDTGVPDGMEAEDLSVPCLGKA 216

  Fly   105 ------HHADDDG-----------------HEIDQ-------VGDVDDECVILDDDD---EEDED 136
                  .||.||.                 |.:|:       ...|.|..|.|.|::   |.:.:
Mouse   217 DTVNQILHAFDDSKEYVAAQLGQLPAQLLKHAVDEEVFKNTLEASVSDLKVTLADEEAPMEPENE 281

  Fly   137 HVYD-------DEPQSGDGDAEGKAQDDGAENNGDDKAIIHGEE--ENTGDTGNMDNDESINLTI 192
            .:.|       .||...:|....:.......:.|.|:.:...|:  |:.|.....:.:|      
Mouse   282 KILDILGETCKSEPVKEEGSELEQPFAQATSSVGPDRKLAEEEDLFESCGHPEEEEEEE------ 340

  Fly   193 GEDEQKLLHDEASD---DKSIKSVKPANKSEKSNS---------KDADKKNDDGARSKKRDEKSG 245
             |::|:...:|..|   ..|.||..|:.:.:.|.:         :.||.....|....:|..|..
Mouse   341 -EEDQEEEQEEEGDLALASSSKSESPSTRCQWSEADAPLAVVKRELADAPGGGGGTRHRRKRKRR 404

  Fly   246 DK-----------------------KDSSEQKS---------------------SGKSSNQKDDK 266
            .|                       ::..||.|                     |.:..:.|:|.
Mouse   405 RKHQAQAEALGTGGGAGMNCEPVGLEEPVEQSSTAAQLPEATSQELVRAPTAALSPEPQDSKEDV 469

  Fly   267 EK-----STAAPGGATSSTASSAAGSKSGSGSSAGNGTGANSNNK-QATLS--RNLWVSGLSTLT 323
            :|     ....|.....|:||..|..|..|.....:......:.| :|:.|  |||||||||:.|
Mouse   470 KKFAFDACNDVPAPPKESSASEGADQKMSSVKEEQDIKPVIKDEKGRASCSSGRNLWVSGLSSST 534

  Fly   324 RASDLKAIFSKFGKVIGAKVVTNTRTPGTRCYGYVTMSSSADASRCIENLHRTELHGRIISVERT 388
            ||:|||::|||.|||||||||||.|:||.||||:||||:|.:|::||.:|||||||||:||||:.
Mouse   535 RAADLKSLFSKHGKVIGAKVVTNARSPGARCYGFVTMSTSDEATKCISHLHRTELHGRMISVEKA 599

  Fly   389 KNEIGGSLNSK----EGKGKAPG-DAGNK----------KKEDDSGKKSGSGKGSSSNSGDDKKG 438
            |||.....:|.    :.|.|.|| |..:.          |||:...:|...|      ..|.||.
Mouse   600 KNEPSEKKSSDRRACDQKEKVPGPDRPHPVKIKTEKTVIKKEEKLERKEEKG------PEDIKKE 658

  Fly   439 GDGNGDSKSVGGDLKRDGKESNRARSR---RNDDRGKSLASQDRPRHDRERSAKGSQDHRS-GRN 499
            .|.:..:....|. .|..|..:|...|   .:..:|:.:.|.......::|.:..|||.:| ||.
Mouse   659 KDQDELTPGAAGH-SRVTKSGSRGMERTVVMDKSKGEPVISVKATSRSKDRQSSKSQDRKSEGRE 722

  Fly   500 PRDVDREIQQRQRERERRQREMLSYQKIREERERQRLRERERELREEERRR-REARER------- 556
            .||:                  ||:.||:|:|||:|.|:||||:||.|||| ||.|||       
Mouse   723 KRDI------------------LSFDKIKEQRERERQRQREREIRETERRREREQREREQRLDAF 769

  Fly   557 -QRIEEERLQEERRKLAVERERLEREKAELLRMERERQKLERE------KIELERLELKRQQMKI 614
             :|.|:.|||.||.:|..:|:|||||:.|..|:||||.::|||      :|..||.||:|||.::
Mouse   770 QERREKARLQRERMQLQCQRQRLERERLERERLERERMRVERERRKEQQRIMREREELRRQQEQL 834

  Fly   615 --------------MESRDDPGKRGVSKRA--DDRYGDVTDRKRTAIFDAPPPPRFDTNLVSSRS 663
                          :::|.|.|.....|||  :|||.|.              ||.|...     
Mouse   835 RAEQERRALRRPYDLDARRDDGYWPEGKRAALEDRYRDF--------------PRPDHRF----- 880

  Fly   664 TYDKKHDDYG---------SSSSTKRV--------LDDYSSSSKRL-----DYSSKRNDYSSSSG 706
             :|..|.|.|         ...|..||        .||..|..:.|     |.....:.|||...
Mouse   881 -HDFDHRDRGHYQEHVIDRRDGSRTRVEERDGQYYPDDQHSHGRLLEHHAWDSGDGWHGYSSDKK 944

  Fly   707 SKRGAVDDYTAVPTKRSNDYSASSSSKRDDYKRDEVRHLPLSGTVGGGSSSSYLHKNNTAGGGAG 771
            ...|   .....|.:.|.:::..||...:  ::..|.|..:...:.|.....:........||.|
Mouse   945 LNEG---QGLPPPPRVSREWAEHSSQLEE--QQVPVWHSAVDTNMTGHEHIRWRGAERGLAGGPG 1004

  Fly   772 SYVHKNNTSGTGG 784
               |.:..:|.||
Mouse  1005 ---HGHVAAGRGG 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Saf-BNP_733041.2 SAP 11..42 CDD:460424 19/30 (63%)
2A1904 <16..>270 CDD:273344 79/383 (21%)
RRM_SF 311..386 CDD:473069 56/76 (74%)
SWIRM-assoc_1 <588..618 CDD:465142 15/49 (31%)
Safb2XP_006524220.1 SAP 97..131 CDD:460424 19/33 (58%)
RRM_SAFB1_SAFB2 522..597 CDD:410080 55/74 (74%)

Return to query results.
Submit another query.