Protein Alignment Saf-B and rsp-8

DIOPT Version :9

• Sequence 1: NP_733041.2
• Gene: Saf-B / 42958
• FlyBaseID: FBgn0039229
• Length: 928
• Species: Drosophila melanogaster
• Sequence 2: NP_001255142.1
• Gene: rsp-8 / 176613
• WormBaseID: WBGene00004705
• Length: 309
• Species: Caenorhabditis elegans
• Alignment Length: 309
• Identity: 74/309 - (23%)
• Similarity: 115/309 - (37%)
• Gaps: 57/309 - (18%)

  Fly   221 KSNSKDADKKNDDGARSKKRDEKSGDKKDSSEQKSSGKSSNQKDDKEKSTAAPGGATSSTASSAA 285
            :|||:         ::|:.|:...|..:.:|:.....:...:........|..||
 Worm     6 RSNSR---------SQSRSRENSRGRSRSASKSPVYHRRERESSRSRSPRARYGG---------- 51

  Fly   286 GSKSGSGSSAGNGTGANS----NNKQATLSRNLWVSGLSTLTRASDLKAIFSKFGKVIGAKVVTN 346
                |.|...|.|.|.|.    .|.|.  |:.|.|..||:.|...||:.:|.:||::....:|.:
 Worm    52 ----GGGGGGGGGRGRNQQYDRENPQP--SKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYD 110

  Fly   347 TRTPGTRCYGYVTMSSSADASRCIENLHRTELHGRIISVERTKNEIGGS------LNSKEGKGKA 405
            ..:..:|.:|::..:...||:...:.|..|:|.|..|.|:.:..:.|.|      :..:.|.|.:
 Worm   111 RPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQYMGDRRGGGSS 175

  Fly   406 PG---DAGNKKKEDDSGKKSGSGKGSSSNSGDDKKGGD--GNGDSKSVGGDL-----KRDGKESN 460
            .|   ..|...:.:|.|.:.|...|.....|....|||  |.|.....|||.     .|.|....
 Worm   176 GGGRFGGGGGDRFNDRGSRGGDRYGGDRRGGGGGGGGDRYGGGGGDRYGGDRYGGGGGRRGSPDR 240

  Fly   461 RARSRRNDDRGKSLAS------QDRPRH-DRERSAKGSQDHRSGRNPRD 502
            |...|.....|..:.|      .||..| |.:|:..|     .|..|.|
 Worm   241 RGGFRSGGGGGGYMRSGGGGGGPDRRDHRDNDRNGGG-----GGHRPYD 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Saf-B	NP_733041.2	SAP	11..42	CDD:280251
		RRM	205..>394	CDD:223796	40/176 (23%)
		RRM_SAFB_like	313..386	CDD:240863	20/72 (28%)
		SWIRM-assoc_1	<588..618	CDD:293104
rsp-8	NP_001255142.1	RRM_TRA2	77..154	CDD:240809	21/76 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1765
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.030