DRSC/TRiP Functional Genomics Resources

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Protein Alignment Saf-B and sltm

DIOPT Version :9

Sequence 1:NP_733041.2 Gene:Saf-B / 42958 FlyBaseID:FBgn0039229 Length:928 Species:Drosophila melanogaster
Sequence 2:NP_001096306.2 Gene:sltm / 100124884 XenbaseID:XB-GENE-6456756 Length:1016 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Saf-BNP_733041.2 SAP 11..42 CDD:280251
RRM 205..>394 CDD:223796
RRM_SAFB_like 313..386 CDD:240863
SWIRM-assoc_1 <588..618 CDD:293104
sltmNP_001096306.2 SAP 30..64 CDD:128789
MDN1 <67..349 CDD:227596
PTZ00121 <257..>615 CDD:173412
RRM_SLTM 363..436 CDD:241122
PRK12678 <798..>939 CDD:237171
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 118 1.000 Domainoid score I5781
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 307 1.000 Inparanoid score I2591
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48360
Panther 1 1.100 - - O PTHR15683
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1765
SonicParanoid 1 1.000 - - X1802
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.090

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