Protein Alignment CG5808 and AT1G01940

DIOPT Version :10

• Sequence 1: NP_651291.1
• Gene: CG5808 / 42957
• FlyBaseID: FBgn0027617
• Length: 653
• Species: Drosophila melanogaster
• Sequence 2: NP_171696.2
• Gene: AT1G01940 / 839309
• AraportID: AT1G01940
• Length: 160
• Species: Arabidopsis thaliana
• Alignment Length: 281
• Identity: 51/281 - (18%)
• Similarity: 91/281 - (32%)
• Gaps: 97/281 - (34%)

  Fly   268 EPVDDDEYKVSQSEVESEPATSDDSFSPPNKRKRTPKRRVGRPPGRGRPGRKPKNMVVS------ 326
            :|:||   |.|...:|.:...|.||           :.:.|:......|.:.||..::.
plant   248 KPLDD---KYSSLLLEDDEMLSQDS-----------ENQSGKSDADKAPWQMPKEQLLQWKRNRR 298

  Fly   327 -------------TPKFAVKRG------------------PGRPP---KYPKTSSLTNI---VYI 354
                         .|:..:|:|                  .|.||   ..|:.:....|   |.:
plant   299 ALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAILYEMLVGYPPFCSDDPRITCRKIINWRVCL 363

  Fly   355 EAPEDSSSSGEEAEVTPKRRKRGDNPCPKCDEVLPSQLALK--QHLKTHP---GDRFDCDRCALF 414
            :.||:...|.|..::..:.         .||  :.|:|..:  :.:|:||   |..:|     ..
plant   364 KFPEEPKISDEARDLICRL---------LCD--VDSRLGTRGVEEIKSHPWFKGTPWD-----KL 412

  Fly   415 FRTEKAL---------SNHIERHKKADKIREEK------RKEREQRIEQRSRYTPKSSDAEKSKL 464
            :..|.|.         :.:.|:..:.:....|.      ||....:......:|.|.||..:|.
plant   413 YDMEAAYRPIVDGELDTQNFEKFPEVEGSPSEAPQVGPWRKMLTSKDTNFIGFTFKKSDITRSM- 476

  Fly   465 ISPQGSATAEKKKKSEPSAAS 485
               :.|.:|:.|......|.|
plant   477 ---ESSGSADMKSNGSGEAPS 494

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5808	NP_651291.1	cyclophilin_RRM	4..169	CDD:238902
		RRM_PPIL4	237..319	CDD:409681	11/50 (22%)
		PRK12678	344..>510	CDD:237171	31/165 (19%)
		U2AF_lg	467..>572	CDD:273727	5/19 (26%)
AT1G01940	NP_171696.2	Cyclophilin_PPIL3_like	1..153	CDD:238909