Protein Alignment CG5808 and U1-70K

DIOPT Version :9

• Sequence 1: NP_651291.1
• Gene: CG5808 / 42957
• FlyBaseID: FBgn0027617
• Length: 653
• Species: Drosophila melanogaster
• Sequence 2: NP_190636.1
• Gene: U1-70K / 824230
• AraportID: AT3G50670
• Length: 427
• Species: Arabidopsis thaliana
• Alignment Length: 426
• Identity: 100/426 - (23%)
• Similarity: 170/426 - (39%)
• Gaps: 116/426 - (27%)

  Fly   179 PSPSAERLKNGRIAADEDIDDTDGMTAEEMQEMLAEREAKARATILEIVGDLPDADMAPPENVLF 243
            ||...||:...|:  ::.::    ..||::::.....:..|       .||        |...||
plant    98 PSQKRERIHKLRL--EKGVE----KAAEDLKKYDPNNDPNA-------TGD--------PYKTLF 141

  Fly   244 VCKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDD 308
            |.:||..:::..::..|.|:|.:|...::.|:.|.....|||:|:...:..:|||.:.|...||.
plant   142 VSRLNYESSESKIKREFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDG 206

  Fly   309 RRIHVDFSQSVSKVTWR-------------GKGRGIEGDYRKLDFNNLRDDKDHRKPNNGRSRTE 360
            ||:.||..:..:...||             |.|..|.|:               ::| .||:...
plant   207 RRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGEEIVGE---------------QQP-QGRTSQS 255

  Fly   361 DHKERNRTEDFRNRMSSAERRKAREQRHQEQSERDVRKNLQRRTRSKEKDEKSVYRSKKSQNESV 425
            :...|.|.|..::|....||.::||..|::..||
plant   256 EEPSRPREEREKSREKGKERERSRELSHEQPRER------------------------------- 289

  Fly   426 RENSNRERNRNEKRSSRSRDATHRRYSRSRDREERRPSRPRDQLGRRSRSRDQKERRRSRPREQN 490
                :|:|.|.:|. .|.||    :..|.|||:.||.         |.|:||:.:|.|
plant   290 ----SRDRPREDKH-HRDRD----QGGRDRDRDSRRD---------RDRTRDRGDRDR------- 329

  Fly   491 ERRRSRSRDQTGKRPTQNRDRNDSRRFHSPQEGRRNDERSHRETSRNQRRSPERRQQSRNREDHR 555
             |.|.|.||:|    :::.||:.||:.....||   .|..|....|::.|..|.|.:......:.
plant   330 -RDRDRGRDRT----SRDHDRDRSRKKERDYEG---GEYEHEGGGRSRERDAEYRGEPEETRGYY 386

  Fly   556 MDTHSSPNKSHEKKRKLSVE--KSKKQAKKSKRAAS 589
            .|.....::...:..|:..:  :.:::.|:|||:.|
plant   387 EDDQGDTDRYSHRYDKMEEDDFRYEREYKRSKRSES 422

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5808	NP_651291.1	cyclophilin_RRM	4..169	CDD:238902
		RRM	<237..445	CDD:223796	51/220 (23%)
		RRM_PPIL4	237..319	CDD:240681	26/81 (32%)
U1-70K	NP_190636.1	U1snRNP70_N	40..128	CDD:403437	7/35 (20%)
		RRM_snRNP70	137..227	CDD:409682	27/89 (30%)
		PRK12678	245..>395	CDD:237171	52/229 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910