DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and Ppil2

DIOPT Version :10

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:XP_006522510.1 Gene:Ppil2 / 66053 MGIID:2447857 Length:564 Species:Mus musculus


Alignment Length:165 Identity:60/165 - (36%)
Similarity:91/165 - (55%) Gaps:9/165 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSSIW 67
            |.:.|..|||.::|.....|..|.||:|||:.:||:..:||...:.|:.|.|||:|.|.||.|.|
Mouse   282 VRLHTNKGDLNLELHCDLTPKTCENFIKLCKKQYYDGTIFHRSIRNFVIQGGDPTGTGTGGESFW 346

  Fly    68 GVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGEVVEG 132
            |       :.|:.||.|.::|:..|:||:.::|.|...||||:|. .:...||..|.:.|.||.|
Mouse   347 G-------KPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITF-RSCAYLDKKHTIFGRVVGG 403

  Fly   133 HEVLRKLNDAIVD-DSFRPYQDIRITHTVVLEDPF 166
            .:.|..:.:...| .:.||.:::.|..|.|..||:
Mouse   404 FDTLTAMENVESDPKTDRPKEEVLICTTTVFVDPY 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 59/164 (36%)
RRM_PPIL4 237..319 CDD:409681
PRK12678 344..>510 CDD:237171
U2AF_lg 467..>572 CDD:273727
Ppil2XP_006522510.1 RING-Ubox_PPIL2 38..110 CDD:438325
RING_Ubox 101..159 CDD:473075
cyclophilin_RING 281..440 CDD:238904 60/165 (36%)
Blue background indicates that the domain is not in the aligned region.

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