DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and Ppib

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_071981.1 Gene:Ppib / 64367 RGDID:620312 Length:208 Species:Rattus norvegicus


Alignment Length:165 Identity:60/165 - (36%)
Similarity:88/165 - (53%) Gaps:17/165 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MGDLTVDLFISERPIACLNFLKLCRLKY---YNFNLFHTVQQGFIAQTGD-PSGAGDGGSSIWGV 69
            :|.:|..||....|....||:.|...:.   |..:.||.|.:.|:.|.|| ..|.|.||.||:| 
  Rat    49 VGRVTFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYG- 112

  Fly    70 VEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTS-LDGNHCVIGEVVEGH 133
                 :||.:..|  |:.|...|.:|:.:|||:..|||||:|..:  || |||.|.|.|:|:||.
  Rat   113 -----ERFPDENF--KLKHYGPGWVSMANAGKDTNGSQFFITTVK--TSWLDGKHVVFGKVLEGM 168

  Fly   134 EVLRKLNDAIVDDSFRPYQDIRITH--TVVLEDPF 166
            :|:||:.:...|...:|.:|:.|..  .:.:|.||
  Rat   169 DVVRKVENTKTDSRDKPLKDVIIVDCGKIEVEKPF 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 60/165 (36%)
RRM <237..445 CDD:223796
RRM_PPIL4 237..319 CDD:240681
PpibNP_071981.1 cyclophilin_ABH_like 37..195 CDD:238907 57/155 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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