DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and ppifb

DIOPT Version :10

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_001032199.2 Gene:ppifb / 641328 ZFINID:ZDB-GENE-051030-126 Length:192 Species:Danio rerio


Alignment Length:153 Identity:57/153 - (37%)
Similarity:80/153 - (52%) Gaps:14/153 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MGDLTVDLFISERPIACLNFLKLCRLKY---YNFNLFHTVQQGFIAQTGD-PSGAGDGGSSIWGV 69
            :|.:|.:|.....|....||..||..::   |..::||.|...|:.|.|| .:..|.||.||:| 
Zfish    44 LGRVTFELNADVVPKTAENFRALCTGEHGFGYKGSIFHRVIPQFMCQGGDFTNHNGTGGKSIYG- 107

  Fly    70 VEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGEVVEGHE 134
                 .||.:..|  |:.|:..|:||:.:||.|..|||||:...:. ..|||.|.|.|.|.||.:
Zfish   108 -----PRFPDENF--KLKHTGPGILSMANAGVNTNGSQFFICTAKT-EWLDGRHVVFGSVKEGMD 164

  Fly   135 VLRKLNDAIVDDSFRPYQDIRIT 157
            |:||: :|:...|.|..|.|.||
Zfish   165 VVRKV-EALGSRSGRTAQRISIT 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 57/153 (37%)
RRM_PPIL4 237..319 CDD:409681
PRK12678 344..>510 CDD:237171
U2AF_lg 467..>572 CDD:273727
ppifbNP_001032199.2 cyclophilin_ABH_like 31..189 CDD:238907 57/153 (37%)
Blue background indicates that the domain is not in the aligned region.

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