DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and ppil4

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_001121802.1 Gene:ppil4 / 554886 ZFINID:ZDB-GENE-030131-6251 Length:454 Species:Danio rerio


Alignment Length:522 Identity:251/522 - (48%)
Similarity:335/522 - (64%) Gaps:72/522 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSS 65
            |:|::|||:||:.:||:..|||.|.|||||||::||||:.|.|.||:.||.|||||:|.|.||.|
Zfish     1 MAVLLETTLGDIVIDLYTEERPKASLNFLKLCKIKYYNYCLIHNVQRDFIIQTGDPTGTGRGGES 65

  Fly    66 IWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGEVV 130
            ::..:.|.|.||||:|.:|:|.|...|.:|:|:.|.:..||||.:|.|||:..|||.|.|.|||.
Zfish    66 VFCKLYGDQARFFESEKMPRIKHRKKGTVSMVNNGSDQHGSQFLITTGENVDYLDGVHTVFGEVT 130

  Fly   131 EGHEVLRKLNDAIVDDSFRPYQDIRITHTVVLEDPFPNPRGLQAPSRSPSPSAERLKNGRIAADE 195
            ||.:||.|:|:..||:.|.|:|||||.|||:|:|||.:|.||..|.|||.|:.::|.:|||.|||
Zfish   131 EGMDVLAKINETFVDNDFIPFQDIRINHTVILDDPFDDPAGLPVPDRSPEPTKQQLDSGRIGADE 195

  Fly   196 DIDDTDGMTAEEMQEMLAEREAKARATILEIVGDLPDADMAPPENVLFVCKLNPVTTDDDLEIIF 260
            .|:|.:|...||:.|::.::|||.:|.:||:||||||||:.|||||||||||||||||:||||||
Zfish   196 AINDDEGKDPEELDELIKDKEAKTQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIF 260

  Fly   261 SSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR 325
            |.||::|.||:|||.|||:||.|||:|||.::.||.|||||||||||||||||||||||||:.|:
Zfish   261 SRFGLIKCCEIIRDWKTGESLCYAFIEFEKEEDCEKAYFKMDNVLIDDRRIHVDFSQSVSKIKWK 325

  Fly   326 GKGRGIEGDYRKLDFNNLRDDKDHRKPNNGRSRTEDHKERNRTEDFRNRMSSAERRKAREQRHQE 390
            |||    |.|.|.||.....|.|::.                      :::..::.|:::....|
Zfish   326 GKG----GKYTKDDFKAYEKDLDNKA----------------------KLALKDKVKSKQDSRYE 364

  Fly   391 ----QSERDVRKNLQRRTRSKEKDEKSVYRSKKSQNESVRENSNRERNRNEKRSSRSRDATHRRY 451
                :.|.|.||:      .:||                     |||.|:.. |.|::|      
Zfish   365 LLLDEDEDDGRKD------DREK---------------------RERKRHSD-SERTKD------ 395

  Fly   452 SRSRDREERRPSRPRDQLGRRSRSRDQKERRRSRPREQNERRRSRSRDQTGKRPTQNRDRNDSRR 516
            .||:||:|.|  |.:|:..:|||||| :||::.:.||     |.|.||...||..:.|.|:..|.
Zfish   396 KRSKDRDESR--REKDRSRQRSRSRD-RERQKDKQRE-----RGRDRDGDHKRHRRERSRSPKRS 452

  Fly   517 FH 518
            .|
Zfish   453 RH 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 90/164 (55%)
RRM <237..445 CDD:223796 95/211 (45%)
RRM_PPIL4 237..319 CDD:240681 66/81 (81%)
ppil4NP_001121802.1 cyclophilin_RRM 4..169 CDD:238902 90/164 (55%)
RRM 172..>320 CDD:223796 100/147 (68%)
RRM_PPIL4 237..319 CDD:240681 66/81 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591906
Domainoid 1 1.000 185 1.000 Domainoid score I3327
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12126
Inparanoid 1 1.050 468 1.000 Inparanoid score I1498
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1436035at2759
OrthoFinder 1 1.000 - - FOG0005630
OrthoInspector 1 1.000 - - oto41429
orthoMCL 1 0.900 - - OOG6_102469
Panther 1 1.100 - - LDO PTHR45843
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R965
SonicParanoid 1 1.000 - - X4034
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.790

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