DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and ppifa

DIOPT Version :10

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_001004626.1 Gene:ppifa / 447887 ZFINID:ZDB-GENE-040912-52 Length:189 Species:Danio rerio


Alignment Length:132 Identity:47/132 - (35%)
Similarity:71/132 - (53%) Gaps:13/132 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MGDLTVDLFISERPIACLNFLKLCRLKY---YNFNLFHTVQQGFIAQTGD-PSGAGDGGSSIWGV 69
            :|.:.::||....|....||..||..::   |..::||.:...|:.|.|| .:..|.||.||:| 
Zfish    41 IGRIIIELFADVVPKTVANFRALCTGEHGFGYKGSVFHRIIPEFMCQGGDFTNHNGTGGKSIYG- 104

  Fly    70 VEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGEVVEGHE 134
                 |:|.:..|  |:.|:.||:||:.::|.|..|||||:...:. ..|||.|.|.|:|.||.|
Zfish   105 -----KKFNDENF--KLKHTGAGILSMANSGPNTNGSQFFICTAKT-EWLDGKHVVFGQVKEGME 161

  Fly   135 VL 136
            .:
Zfish   162 TV 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 47/132 (36%)
RRM_PPIL4 237..319 CDD:409681
PRK12678 344..>510 CDD:237171
U2AF_lg 467..>572 CDD:273727
ppifaNP_001004626.1 cyclophilin_ABH_like 28..186 CDD:238907 47/132 (36%)
Blue background indicates that the domain is not in the aligned region.

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