DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and ppil3

DIOPT Version :10

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_001002146.1 Gene:ppil3 / 415236 ZFINID:ZDB-GENE-040625-159 Length:161 Species:Danio rerio


Alignment Length:167 Identity:64/167 - (38%)
Similarity:98/167 - (58%) Gaps:9/167 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSS 65
            |:|.:.|.:||:.::||..:.|.:|.|||.||...:||..:||...:|||.|||||:|.|.||:|
Zfish     1 MAVTLHTDLGDMKIELFCEKAPKSCENFLALCAGGFYNGCIFHRNIKGFIVQTGDPTGTGKGGTS 65

  Fly    66 IWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGEVV 130
            |||       |.||.||...:.|:..|::::.:.|.|...||||.|..:. ..||..:.|.|:::
Zfish    66 IWG-------RKFEDEFSEHLKHNVRGVVAMANNGPNTNASQFFFTYAKQ-PHLDMKYTVFGKII 122

  Fly   131 EGHEVLRKLNDAIVDD-SFRPYQDIRITHTVVLEDPF 166
            :|.|.|.::....|:: :|||..|:||....:..:||
Zfish   123 DGLETLDEIEKLPVNEKTFRPLNDVRIKDVTIHANPF 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 62/164 (38%)
RRM_PPIL4 237..319 CDD:409681
PRK12678 344..>510 CDD:237171
U2AF_lg 467..>572 CDD:273727
ppil3NP_001002146.1 Cyclophilin_PPIL3_like 1..154 CDD:238909 62/160 (39%)
Blue background indicates that the domain is not in the aligned region.

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