DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5808 and ppid

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_001002065.1 Gene:ppid / 415155 ZFINID:ZDB-GENE-040625-34 Length:371 Species:Danio rerio


Alignment Length:443 Identity:90/443 - (20%)
Similarity:155/443 - (34%) Gaps:141/443 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MGDLTVDLFISERPIACLNFLKLC-----------RLKYYNFNLFHTVQQGFIAQTGDPSGA-GD 61
            :|.:..:||....|....||..||           :..::....||.:.:.|:.|.||.|.. |.
Zfish    29 VGRVVFELFADVVPKTAENFRALCTGEKGVGKSTGKPLHFKGCPFHRIIKSFMIQGGDFSNQNGT 93

  Fly    62 GGSSIWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVI 126
            ||.||:|      .:|.:..|..|  |...|:||:.:||.|..|||||:|.... ..|||.|.|.
Zfish    94 GGESIYG------DKFEDENFHYK--HDREGLLSMANAGPNTNGSQFFITTVPT-PHLDGKHVVF 149

  Fly   127 GEVVEGHEVLRKLNDAIVDDSFRPYQDIRITHTVVLEDPFPNPRGLQAPSRSPSPSAERLKNGRI 191
            |:|::|..|::.|      ::....:|..:...|:.|                        .|..
Zfish   150 GQVLKGMGVVKML------EAMETKEDNPVKPCVIAE------------------------CGEH 184

  Fly   192 AADED----IDDTDGMTAEEMQEMLAEREAKARATILEIVGDLP---DADMAPPENVLFVCKLNP 249
            .|.:|    ::|..|                      :...|.|   :.|....:.||.|.    
Zfish   185 KAGDDWSIALNDGSG----------------------DAYPDFPEDSEVDFKDVDKVLSVA---- 223

  Fly   250 VTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIHVD 314
                :||:.|.::|            ....:.|.|..::    |....|.:|...::||     |
Zfish   224 ----EDLKNIGNNF------------FKAQNWQSAIKKY----SKALRYLEMCGNIVDD-----D 263

  Fly   315 FSQSVSKVT-----------------WRGKGRGIEGDYRKLDFNNLRDDKDHRKPNNGRSRTEDH 362
            .||...:.|                 |:   ..||.....|:.|........|:....:...|.:
Zfish   264 SSQKKLEPTALSCILNTAACKLKLKLWQ---EAIESCDEVLELNQTNTKALFRRAQAWQGLKEFN 325

  Fly   363 KERNRTEDFRNRMSSAERRKAREQRHQEQSERDVRKNLQRRTRSKEKDEKSVY 415
            |            :..:.:||.|...::::..:....::::.:.:::.||.:|
Zfish   326 K------------AMVDLKKAHEIAPEDKAIGNEMNKVKQQVKEEKEKEKKIY 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 50/171 (29%)
RRM <237..445 CDD:223796 32/196 (16%)
RRM_PPIL4 237..319 CDD:240681 17/81 (21%)
ppidNP_001002065.1 cyclophilin_ABH_like 16..182 CDD:238907 50/191 (26%)
TPR_11 223..304 CDD:290150 19/112 (17%)
TPR repeat 223..268 CDD:276809 14/73 (19%)
TPR_12 271..340 CDD:290160 12/83 (14%)
TPR repeat 273..303 CDD:276809 4/32 (13%)
TPR repeat 308..336 CDD:276809 5/39 (13%)
TPR_1 309..341 CDD:278916 6/43 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

Return to query results.
Submit another query.