DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and ppig

DIOPT Version :10

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_001001234.1 Gene:ppig / 407915 XenbaseID:XB-GENE-5805534 Length:736 Species:Xenopus tropicalis


Alignment Length:795 Identity:194/795 - (24%)
Similarity:318/795 - (40%) Gaps:243/795 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GDLTVDLFISERPIACLNFLKLCR------------LKYYNFNLFHTVQQGFIAQTGDPS-GAGD 61
            |.:..:||....|..|.||..||.            |.|.|. :||.|.:.|:.|.||.| |.|.
 Frog    22 GRVVFELFSDVCPKTCENFRSLCTGERGIGKSTQKPLHYKNC-MFHRVVKDFMIQGGDFSEGNGR 85

  Fly    62 GGSSIWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVI 126
            ||.||:|       .|||.|.. .|.|:...:||:.:.||:..|||||:|. :....|||.|.|.
 Frog    86 GGESIYG-------GFFEDENF-SIQHNKEFLLSMANRGKDTNGSQFFITT-KPTPHLDGLHVVF 141

  Fly   127 GEVVEGHEVLRKLNDAIVDDSFRPYQDIRITHTVVL---------------------EDPFPNPR 170
            |:|:.|.:::|::.:...|.|.:|..|:.|.:...|                     ||...:..
 Frog   142 GQVISGQDLVREIENQKTDASSKPSVDVSIQNCGELVQKSKAKKEKKRHKSSSSSGSEDSSDSDS 206

  Fly   171 GLQAPSRSPSPSAERL---------------------KNGRIAADEDIDDTDGMTAEEMQEMLAE 214
            ...:.|.|.|...|:|                     |..:.::|||.::              :
 Frog   207 SSDSSSDSKSEGEEKLKKKKRKHKKNSKKQKKEKRKRKKSKKSSDEDENE--------------D 257

  Fly   215 REAKARATILEIVGDLPDADMAPPENVLFVCKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGD 279
            :|.:..:|:      .|:.....||| .|:.:.:|...|                  .::.:..|
 Frog   258 QELQVSSTV------RPEEIPTIPEN-KFLMRKSPQRED------------------AKESQRND 297

  Fly   280 SLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIHVD-------------------------FSQSV 319
            .      |.|.:.:.:|:.::        ||:.|.                         |.:|.
 Frog   298 R------ERERESNMQASLYQ--------RRLLVTRSGRKIKGRGPRRYRTPSRSRSRDRFRRSE 348

  Fly   320 SKVTWRGK------------GRGIEGDYRKLDFNNLRDDKDHRK-PNNGRSR------------- 358
            :...||.:            .|.|:||  |.:.|    |||::| |..||.|             
 Frog   349 TPPHWRQEMQRTQRMRYSSGERWIKGD--KSEMN----DKDNQKSPVRGRERKSSDQRPVSESPS 407

  Fly   359 -------TEDHKERNRTEDFRNRMSSAER-------RKAREQRHQEQSE--------RDVRKNLQ 401
                   .:|||..::..|.:......||       ::.|.:|..|..|        :..:.:::
 Frog   408 QKGDREKQKDHKSASKERDLKKDAEKEERPNKSRSSKRTRSERRSESKENSKSNKDSKHSKHDVK 472

  Fly   402 RRTRSKE------KDEKSVYRSKKSQNESVRENSNRERNRNEKRSSRSRDATHRRY--SRSRDRE 458
            .|::|||      |::.|..::|:......||......::||:..|:.|:.|..|.  ||||:||
 Frog   473 ARSKSKERAHEKGKEKNSSDKAKEKDRSKSRERVKHSSSKNERAKSKEREKTRERQGKSRSRERE 537

  Fly   459 ERRP-----SRPRD-----QLGRRSRSRDQKERR-------RSRPREQNERRRSRSRDQTGKRPT 506
            ..|.     ||.::     :..||:|||.|.:.|       :|:.||...|.||||||:.|   |
 Frog   538 SARTKHGSNSRAKERSKSRENSRRARSRSQDDTRTRSRDHAKSKDRETKRRGRSRSRDRKG---T 599

  Fly   507 QNRDRNDSRRFHSPQEGRRNDERSHRETSRNQRRSPERRQQSRNREDHRMDTHSSPNKSHEKKRK 571
            .::.:|      ...:.|.:.:.|:||||:::.:...|:.:|::      ...||.::||:::|.
 Frog   600 PDKSKN------KESKSRDDSKDSNRETSQSKSKDSLRKDESKH------SRKSSEHESHQRRRS 652

  Fly   572 LSVEKSKKQAKKSKRAASSSSDSSESSSESESDSTSSDSSEDSSSS-SSSSDDRSKRKKSTKSKQ 635
            .|.....:.:||. |....|.||:...|:...|.:|:..:.|...: .||.||:..||||    :
 Frog   653 KSSSPENRHSKKG-RDRDRSPDSTNIHSKEREDRSSTHRNRDKDKTRKSSHDDKETRKKS----R 712

  Fly   636 KKSKSKSSHKSKKKH 650
            .:.:..|:.|.||.|
 Frog   713 SRDRDLSNTKDKKNH 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 60/192 (31%)
RRM_PPIL4 237..319 CDD:409681 14/106 (13%)
PRK12678 344..>510 CDD:237171 61/226 (27%)
U2AF_lg 467..>572 CDD:273727 33/116 (28%)
ppigNP_001001234.1 cyclophilin_ABH_like 9..175 CDD:238907 57/162 (35%)
PTZ00121 <282..717 CDD:173412 113/492 (23%)

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