DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and ppil2

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_957285.2 Gene:ppil2 / 393966 ZFINID:ZDB-GENE-040426-1096 Length:524 Species:Danio rerio


Alignment Length:218 Identity:72/218 - (33%)
Similarity:112/218 - (51%) Gaps:22/218 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSSIW 67
            |.:.|..|||.|:|...:.|.|..||:|||:..||:..:||...:.|:.|.|||:|.|.||.|.|
Zfish   282 VRLHTNKGDLNVELHCDKVPKAGENFIKLCKKGYYDGTVFHRSIRNFMIQGGDPTGTGTGGESFW 346

  Fly    68 GVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGEVVEG 132
            |       :.|:.||.|.::|:..|:||:.::|.|...||||:|. .:...||..|.|.|.||.|
Zfish   347 G-------KPFKDEFRPNLSHTGRGILSMANSGPNTNKSQFFITF-RSCAYLDRKHSVFGRVVGG 403

  Fly   133 HEVLRKLNDAIVD-DSFRPYQDIRITHTVVLEDPFPNPRGLQAPSRSPSPSAERLKNGRIAADED 196
            .|.|..:.:...| .:.:|..:|:|..|.|..||:.     :|.::.   :|||.|..     :.
Zfish   404 LETLSAMENVESDPKTDKPKSEIKILSTSVFVDPYE-----EADAQI---AAEREKEA-----QK 455

  Fly   197 IDDTDGMTAEEMQEMLAEREAKA 219
            :::....|:..:.:...|.:.||
Zfish   456 VEEERAQTSALVNKAKTEEKPKA 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 62/165 (38%)
RRM <237..445 CDD:223796
RRM_PPIL4 237..319 CDD:240681
ppil2NP_957285.2 Ubox 42..96 CDD:128780
cyclophilin_RING 281..440 CDD:238904 63/170 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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