DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5808 and CG10907

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_648508.1 Gene:CG10907 / 39331 FlyBaseID:FBgn0036207 Length:502 Species:Drosophila melanogaster


Alignment Length:607 Identity:153/607 - (25%)
Similarity:253/607 - (41%) Gaps:144/607 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSSIW 67
            |:::||:||:.::|:..|.|.||.||::||...||....||.:.:|||.|.|||:|.|.||.||:
  Fly    15 VLLKTTVGDIDIELWARECPKACRNFVQLCLEGYYKNTEFHRLVKGFIVQGGDPNGDGTGGESIY 79

  Fly    68 GVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLG-----ENLTSLDGNHCVIG 127
            |       :.|:.||..::.::..|::.:.::||:..|||||.|..     :|..:|.|.  :.|
  Fly    80 G-------QPFKDEFHSRLRYTRRGLVGMANSGKDDNGSQFFFTFAPTPELQNKNTLFGK--ITG 135

  Fly   128 EVVEGHEVLRKLNDAIVDDSFRPYQDIRITHTVVLEDPFPN--PRGLQAPS-RSPSPSAER--LK 187
            :.:..   :.||.|.|||...||....||..|.||.:||.:  ||.|..|| :|.....||  :|
  Fly   136 DTIYN---MLKLEDGIVDHQERPMHAHRIVSTEVLSNPFDDIVPRILSQPSTKSKKTKKERQGVK 197

  Fly   188 N-GRIAADEDIDDTDGMTAEEMQEMLAEREAKARATILEIVGDLPDADMAPPENVLFVCKLNPVT 251
            | |.::..|:.:..:    ||....:.:...||::  |..|.|.|.....|    :.|.|:... 
  Fly   198 NFGLLSFGEEAEGDE----EETNVYVKQNAGKAKS--LHDVTDDPKLSKEP----IRVPKVEKA- 251

  Fly   252 TDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIHVDFS 316
               |:|            |.:.|....||::      :...:..:...||               
  Fly   252 ---DIE------------EHLSDDCPEDSVK------DKPSTASSDLIKM--------------- 280

  Fly   317 QSVSKVTWRGKGRGIEGDYRKLDFNNLRDDKDHRKPNNGRSRTEDHKERNRT-EDFRNRMSSAER 380
                |::.|.|    .|..:|:            :|...:|.:||.::...| |:.::|..|.|:
  Fly   281 ----KLSKRSK----SGADKKV------------QPVEEKSDSEDDEDVLLTREEEQSRKVSEEK 325

  Fly   381 RKAREQ----RHQEQSERDVRKNLQRRTRSKEKDEKSVYRSKKSQNESVRENSNRERNRNEK--- 438
            .|.||:    :.|.|.::..:..|   ...:||..||......|:|..:.:....:.....|   
  Fly   326 SKIREEIASLKKQYQMDKQSKDKL---VNGQEKAAKSNEIKGSSENHYINDFIESKEKYTAKVKL 387

  Fly   439 -RSSRSRDA-THRRYSRSRDREERRPSRPRDQLGRRSRSRDQKERRRSRPREQNERRRSRSRDQT 501
             ...:||:| |....|:.|.:        .|.|.::|.|.|.:    |.|::.::|         
  Fly   388 QPKGQSREAFTLSLLSKFRTK--------LDNLKQKSSSDDGE----SEPKDIDDR--------- 431

  Fly   502 GKRPTQNRDRNDSRRFHSPQEGRRNDERSHRETSRNQRRSPERRQQSRNREDHRMDTHSSPNKSH 566
                            ...||...:|..||  |......:|...:.:..:.|...|.:...|..:
  Fly   432 ----------------VVEQEIIGDDWLSH--TLNFNSTTPVLAKDANKKGDDWYDAYDPRNPLN 478

  Fly   567 EKKR--KLSVEKSKKQAKKSKR 586
            ::||  ..|.:.|..::|.|||
  Fly   479 KRKRGETGSSKSSSGKSKSSKR 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 62/171 (36%)
RRM <237..445 CDD:223796 39/216 (18%)
RRM_PPIL4 237..319 CDD:240681 11/81 (14%)
CG10907NP_648508.1 cyclophilin_CeCYP16-like 8..178 CDD:238906 64/174 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447238
Domainoid 1 1.000 81 1.000 Domainoid score I449
eggNOG 1 0.900 - - E1_COG0652
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 81 1.000 Inparanoid score I1612
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.790

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