DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and Cypl

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_523874.1 Gene:Cypl / 38069 FlyBaseID:FBgn0035141 Length:176 Species:Drosophila melanogaster


Alignment Length:158 Identity:60/158 - (37%)
Similarity:92/158 - (58%) Gaps:16/158 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSSIW 67
            |.:||:||::||:|:....|..|.||.:|.|..|||..:||.:.:.|:.|.|||:|.|.||:||:
  Fly    23 VTLETSMGEITVELYWKHAPNTCRNFAELSRRGYYNNVVFHRIIRDFMIQGGDPTGTGRGGASIY 87

  Fly    68 GVVEGPQKRFFEAEFLPKIN----HSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGE 128
            |           :||..:::    |:.||:||:.::|.:..|||||:||... ..|||.|.:.|.
  Fly    88 G-----------SEFADELHGDLRHTGAGILSMANSGPDTNGSQFFITLAPT-QWLDGKHTIFGR 140

  Fly   129 VVEGHEVLRKLNDAIVDDSFRPYQDIRI 156
            |..|.||::::.....|.:.||...:||
  Fly   141 VYTGMEVVKRIGMVETDKNDRPVDPLRI 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 59/157 (38%)
RRM <237..445 CDD:223796
RRM_PPIL4 237..319 CDD:240681
CyplNP_523874.1 cyclophilin 24..170 CDD:294131 59/157 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447185
Domainoid 1 1.000 81 1.000 Domainoid score I449
eggNOG 1 0.900 - - E1_COG0652
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.740

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