DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and Cypl

DIOPT Version :10

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_523874.1 Gene:Cypl / 38069 FlyBaseID:FBgn0035141 Length:176 Species:Drosophila melanogaster


Alignment Length:158 Identity:60/158 - (37%)
Similarity:92/158 - (58%) Gaps:16/158 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSSIW 67
            |.:||:||::||:|:....|..|.||.:|.|..|||..:||.:.:.|:.|.|||:|.|.||:||:
  Fly    23 VTLETSMGEITVELYWKHAPNTCRNFAELSRRGYYNNVVFHRIIRDFMIQGGDPTGTGRGGASIY 87

  Fly    68 GVVEGPQKRFFEAEFLPKIN----HSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGE 128
            |           :||..:::    |:.||:||:.::|.:..|||||:||... ..|||.|.:.|.
  Fly    88 G-----------SEFADELHGDLRHTGAGILSMANSGPDTNGSQFFITLAPT-QWLDGKHTIFGR 140

  Fly   129 VVEGHEVLRKLNDAIVDDSFRPYQDIRI 156
            |..|.||::::.....|.:.||...:||
  Fly   141 VYTGMEVVKRIGMVETDKNDRPVDPLRI 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 59/157 (38%)
RRM_PPIL4 237..319 CDD:409681
PRK12678 344..>510 CDD:237171
U2AF_lg 467..>572 CDD:273727
CyplNP_523874.1 cyclophilin 24..170 CDD:469651 59/157 (38%)
Blue background indicates that the domain is not in the aligned region.

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