DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and CG2852

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_611695.1 Gene:CG2852 / 37591 FlyBaseID:FBgn0034753 Length:205 Species:Drosophila melanogaster


Alignment Length:159 Identity:58/159 - (36%)
Similarity:86/159 - (54%) Gaps:17/159 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GDLTVDLFISERPIACLNFLKLCRLK----YYNFNLFHTVQQGFIAQTGD-PSGAGDGGSSIWGV 69
            |.:.:.||....|....||.:|. ||    .|..:.||.:.:.|:.|.|| ..|.|.||.||:| 
  Fly    43 GRIEIGLFGKTVPKTVENFKELA-LKPQGEGYKGSKFHRIIKDFMIQGGDFTKGDGTGGRSIYG- 105

  Fly    70 VEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTS-LDGNHCVIGEVVEGH 133
                 :||.:..|  |:.|..||.||:.:|||:..|||||:|..:  || |||.|.|.|:::.|.
  Fly   106 -----ERFEDENF--KLKHYGAGWLSMANAGKDTNGSQFFITTKQ--TSWLDGRHVVFGKILSGM 161

  Fly   134 EVLRKLNDAIVDDSFRPYQDIRITHTVVL 162
            .|:|::.::..|...||.:|:.|.::..|
  Fly   162 NVVRQIENSATDARDRPVKDVVIANSGTL 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 58/159 (36%)
RRM <237..445 CDD:223796
RRM_PPIL4 237..319 CDD:240681
CG2852NP_611695.1 cyclophilin 30..188 CDD:294131 57/155 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447224
Domainoid 1 1.000 81 1.000 Domainoid score I449
eggNOG 1 0.900 - - E1_COG0652
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.740

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