DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and Cwc27

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:XP_017446439.1 Gene:Cwc27 / 361887 RGDID:1310697 Length:471 Species:Rattus norvegicus


Alignment Length:610 Identity:142/610 - (23%)
Similarity:230/610 - (37%) Gaps:179/610 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSSIW 67
            |:::||.||:.::|:..|.|.||.||::||...||:..:||.|..|||.|.|||:|.|.||.|::
  Rat    15 VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGTGGESVY 79

  Fly    68 GVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGEVVEG 132
            |..       |:.||..::..:..|::::.:||.:..|||||.||| ....|:..|.:.|:|. |
  Rat    80 GAP-------FKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLG-RADELNNKHTIFGKVT-G 135

  Fly   133 HEV--LRKLNDAIVDDSFRPYQDIRITHTVVLEDPFPN--PRGLQAPSRSPSPSAERLKNGRIAA 193
            ..|  :.:|.:..:||..||....||....||.:||.:  ||.::.|.:..              
  Rat   136 DTVYNMLRLTEVDIDDEERPRNPHRIKSCEVLFNPFDDIIPREIKKPKKEK-------------- 186

  Fly   194 DEDIDDTDGMTAEEMQEMLAEREAKARATILEIVGDLPDADMAPPENVLFVCKLNPVTTDDDLEI 258
                               ||.|.|                           ||.|..|.:    
  Rat   187 -------------------AEEEIK---------------------------KLKPKGTKN---- 201

  Fly   259 IFS--SFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIHVDFSQSVSK 321
             ||  |||                     .|.|:::                        :.|::
  Rat   202 -FSLLSFG---------------------EEAEEEE------------------------EEVNR 220

  Fly   322 VTWRGKGRGIEGDYRKLDFNNLRDDKDHRKPNNGRSRTEDHKERNRTEDFRNRMSSAERRKAREQ 386
            |:...|||.      |...:.|:||     |:.......:.::.:.|.|..:....||.......
  Rat   221 VSQSMKGRS------KSSHDLLKDD-----PHLSSVPAVESEKDDATGDLEDLSQDAEDDSVEHD 274

  Fly   387 RHQEQSERDVRKNLQRRTRSKEKDEKSVYRSKKSQNESVRENSNRERNRNEKRSSRSRDATHRRY 451
            ...|:.|    |||.|        |:...|.||..:.:|:...:.|:    |.:|||.:.  |:.
  Rat   275 GSMEEDE----KNLMR--------ERIAKRLKKDASANVKSAGDGEK----KPASRSEEL--RKE 321

  Fly   452 SRSRDREERRPSRPRDQLGRRSRSRDQKERRRSRPREQNERRRSR---SRDQTGKRPTQNRDRN- 512
            :|...||.....:.::...:..:..:::|.....|..:..|.:.:   .|.|..|:.|...|:. 
  Rat   322 ARQLKRELLAAKQKKESATKAEKGSEEEEAVPDGPVAEYRREKQKYEALRKQQPKKGTSREDQTL 386

  Fly   513 ------DSRRFHSPQEGRRNDERSHRETSRN------QRRSPERRQQSRNREDHRMDTHS--SPN 563
                  .|:...:..|...|...:..|....      |.....|:.:..:.:|  .||..  .|.
  Rat   387 ALLSQFKSKLTQAITEMPENCAEAEVEDDEGWMSHVLQFEDKTRKVKDASMQD--SDTFEIYDPR 449

  Fly   564 KSHEKKRKLSVEKSKK--QAKKSKR 586
            ....|:|:   |:|||  :.||.:|
  Rat   450 NPVNKRRR---EESKKLLREKKERR 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 62/168 (37%)
RRM <237..445 CDD:223796 41/209 (20%)
RRM_PPIL4 237..319 CDD:240681 11/83 (13%)
Cwc27XP_017446439.1 cyclophilin_CeCYP16-like 8..177 CDD:238906 63/170 (37%)
TMEM119 <308..>359 CDD:292352 11/56 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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