Protein Alignment CG5808 and Ppil4

DIOPT Version :10

• Sequence 1: NP_651291.1
• Gene: CG5808 / 42957
• FlyBaseID: FBgn0027617
• Length: 653
• Species: Drosophila melanogaster
• Sequence 2: NP_001381983.1
• Gene: Ppil4 / 361449
• RGDID: 1311051
• Length: 492
• Species: Rattus norvegicus
• Alignment Length: 529
• Identity: 259/529 - (48%)
• Similarity: 345/529 - (65%)
• Gaps: 53/529 - (10%)

  Fly     1 MSVVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSS 65
            |:|::|||:||:.:||:..|||.|||||||||::||||:.|.|.||:.||.|||||:|.|.||.|
  Rat     1 MAVLLETTLGDVVIDLYTEERPRACLNFLKLCKIKYYNYCLIHNVQRDFIIQTGDPTGTGRGGES 65

  Fly    66 IWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGEVV 130
            |:|.:.|.|..|||||.:|:|.|...|.:|:|:.|.:..||||.:|.||||..|||.|.|.|||.
  Rat    66 IFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVT 130

  Fly   131 EGHEVLRKLNDAIVDDSFRPYQDIRITHTVVLEDPFPNPRGLQAPSRSPSPSAERLKNGRIAADE 195
            ||.::::|:|:..||..|.|||||||.|||:|:|||.:|..|..|.|||.|:.|:|.:|||.|||
  Rat   131 EGMDIVKKINETFVDKDFVPYQDIRINHTVILDDPFDDPPDLLIPDRSPEPTKEQLDSGRIGADE 195

  Fly   196 DIDDTDGMTAEEMQEMLAEREAKARATILEIVGDLPDADMAPPENVLFVCKLNPVTTDDDLEIIF 260
            :|||..|.:|||::|:.||:|||.:|.:||:||||||||:.|||||||||||||||||:||||||
  Rat   196 EIDDFKGRSAEEVEEIKAEKEAKTQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIF 260

  Fly   261 SSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR 325
            |.||.::.||||||.|||:||.|||:|||.::.||.|:|||||||||||||||||||||:||.|:
  Rat   261 SRFGPIRSCEVIRDWKTGESLCYAFIEFEKEEDCEKAFFKMDNVLIDDRRIHVDFSQSVAKVKWK 325

  Fly   326 GKGRGIEGDYRKLDFNNLRDDKDHRKPNNGRSRTEDHKERNR-TEDFRNRMSSAERRKAREQRHQ 389
            |||    |.|.|.||.....::|  ||.|     ...||:.: .:|.:..:...|:.:..:..|.
  Rat   326 GKG----GKYTKSDFKEYEKEQD--KPAN-----LVLKEKVKPKQDAKYDLILDEQAEDSKSSHS 379

  Fly   390 EQSERDVRKNLQRRTRSKEKDEKSVYRSKKSQNESV----------RENSNRERNRNEKRSSRSR 444
            ..|::..:|.   |..|:||:::. |...|:.|:.:          .|.|..|:.:||||.
  Rat   380 HTSKKHKKKT---RHCSEEKEDED-YMPIKNPNQDIYREMGFGHYEEEESCWEKQKNEKRD---- 436

  Fly   445 DATHRRYSRSRDREERRPSRPRDQLGRRSRSRDQKERRRSRPREQN---ERRRSRSRDQTGKRPT 506
                ||.:|||.               |||.||.......:|:.|.   ||.|||.||:: :.|.
  Rat   437 ----RRQNRSRS---------------RSRERDGHYSNSHKPKYQTDPYERERSRKRDRS-RSPK 481

  Fly   507 QNRDRNDSR 515
            :::|:..|:
  Rat   482 KSKDKEKSK 490

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5808	NP_651291.1	cyclophilin_RRM	4..169	CDD:238902	93/164 (57%)
		RRM_PPIL4	237..319	CDD:409681	65/81 (80%)
		PRK12678	344..>510	CDD:237171	45/179 (25%)
		U2AF_lg	467..>572	CDD:273727	17/52 (33%)
Ppil4	NP_001381983.1	cyclophilin_RRM	4..161	CDD:238902	88/156 (56%)
		RRM_PPIL4	237..319	CDD:409681	65/81 (80%)