DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and Ppial4g

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:XP_341364.2 Gene:Ppial4g / 361080 RGDID:1559682 Length:195 Species:Rattus norvegicus


Alignment Length:136 Identity:42/136 - (30%)
Similarity:66/136 - (48%) Gaps:19/136 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MGDLTVDLFISERPIACLNFLKLCRLKY---YNFNLFHTVQQGFIAQTGDPS-GAGDGGSSIWGV 69
            :|.::::||..:.|....||..|...:.   |..:.||.:..||:.|.|..: ..|.||.||:| 
  Rat    17 LGRVSLELFADKVPRTAENFRSLTTGEKGFGYKGSSFHRIIPGFMCQGGKVTCHNGTGGKSIYG- 80

  Fly    70 VEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGE------ 128
                 ::|....|:  :.|:..|:||:.:||.|..|||||:...:. ..|||...|.|:      
  Rat    81 -----EKFENDSFI--LKHTGPGILSMANAGPNTNGSQFFICTAKT-ERLDGKCVVFGKGRGGTN 137

  Fly   129 VVEGHE 134
            :||..|
  Rat   138 IVEAME 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 42/136 (31%)
RRM <237..445 CDD:223796
RRM_PPIL4 237..319 CDD:240681
Ppial4gXP_341364.2 cyclophilin 7..162 CDD:294131 42/136 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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