DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and CG11777

DIOPT Version :10

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_724939.1 Gene:CG11777 / 36108 FlyBaseID:FBgn0033527 Length:161 Species:Drosophila melanogaster


Alignment Length:166 Identity:64/166 - (38%)
Similarity:92/166 - (55%) Gaps:9/166 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSS 65
            |||.:.|.:|||.::||....|.||.|||.||...||:..:|....:|||.|||||:..|..|.|
  Fly     1 MSVTLHTDVGDLKIELFCDACPKACENFLALCASDYYSGCVFIRNIKGFIVQTGDPTNTGKNGQS 65

  Fly    66 IWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGEVV 130
            |||     ||  |:.||...|.|:..||:|:.:.|.|...||||:|.... .:||..:.:.|.|:
  Fly    66 IWG-----QK--FDDEFKETIKHTDRGMVSMANNGPNANASQFFITYAAQ-PNLDLKYTLFGRVI 122

  Fly   131 EGHEVLRKLNDAIVD-DSFRPYQDIRITHTVVLEDP 165
            :|.:.|.:|....|: .::||:.|.:|....:..:|
  Fly   123 DGFDALDELEKLPVNPKNYRPHVDKKINGVTIHANP 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 61/163 (37%)
RRM_PPIL4 237..319 CDD:409681
PRK12678 344..>510 CDD:237171
U2AF_lg 467..>572 CDD:273727
CG11777NP_724939.1 Cyclophilin_PPIL3_like 1..154 CDD:238909 63/160 (39%)
Blue background indicates that the domain is not in the aligned region.

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