Protein Alignment CG5808 and Ranbp2

DIOPT Version :10

• Sequence 1: NP_651291.1
• Gene: CG5808 / 42957
• FlyBaseID: FBgn0027617
• Length: 653
• Species: Drosophila melanogaster
• Sequence 2: XP_038954525.1
• Gene: Ranbp2 / 294429
• RGDID: 1560047
• Length: 3114
• Species: Rattus norvegicus
• Alignment Length: 135
• Identity: 47/135 - (34%)
• Similarity: 70/135 - (51%)
• Gaps: 13/135 - (9%)

  Fly     9 MGDLTVDLFISERPIACLNFLKLCR-LKYYNF--NLFHTVQQGFIAQTGD-PSGAGDGGSSIWGV 69
            :|.:.::||.:..|....||..||. .|.:.|  ::||.|...||.|.|| ....|.||.||:|
  Rat  2967 LGRIIMELFSNIVPQTAENFRALCTGEKGFGFKNSIFHRVVPDFICQGGDITKYNGTGGQSIYG- 3030

  Fly    70 VEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGEVVEGHE 134
                 .:|.:..|  .:.|:..|:||:.:.|:|...||||:|| :....||..|.|.|.|.:|.:
  Rat  3031 -----DKFDDENF--DLKHTGPGLLSMANCGQNTNSSQFFITL-KKAEHLDFKHVVFGFVKDGMD 3087

  Fly   135 VLRKL 139
            .:||:
  Rat  3088 TVRKI 3092

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5808	NP_651291.1	cyclophilin_RRM	4..169	CDD:238902	47/135 (35%)
		RRM_PPIL4	237..319	CDD:409681
		PRK12678	344..>510	CDD:237171
		U2AF_lg	467..>572	CDD:273727
Ranbp2	XP_038954525.1	LapB	<33..191	CDD:442196
		TPR repeat	59..89	CDD:276809
		RanBD1_RanBP2-like	1180..1296	CDD:270203
		zf-RanBP	1345..1374	CDD:395516
		RanBP2-type Zn finger	1350..1369	CDD:275375
		zf-RanBP	1410..1438	CDD:395516
		RanBP2-type Zn finger	1414..1433	CDD:275375
		zf-RanBP	1473..1502	CDD:395516
		RanBP2-type Zn finger	1477..1496	CDD:275375
		zf-RanBP	1533..1563	CDD:395516
		RanBP2-type Zn finger	1537..1556	CDD:275375
		zf-RanBP	1596..1625	CDD:395516
		RanBP2-type Zn finger	1600..1619	CDD:275375
		zf-RanBP	1655..1683	CDD:395516
		RanBP2-type Zn finger	1659..1678	CDD:275375
		RanBD2_RanBP2-like	1902..2018	CDD:269998
		RanBD3_RanBP2-like	2199..2315	CDD:270204
		IR1-M	2529..2591	CDD:463488
		IR1-M	2605..2665	CDD:463488
		RanBD4_RanBP2-like	2815..2931	CDD:269999
		cyclophilin_ABH_like	2954..3112	CDD:238907	47/135 (35%)