DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and Ppib

DIOPT Version :10

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_035279.2 Gene:Ppib / 19035 MGIID:97750 Length:216 Species:Mus musculus


Alignment Length:168 Identity:59/168 - (35%)
Similarity:89/168 - (52%) Gaps:17/168 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ETTMGDLTVDLFISERPIACLNFLKLCRLKY---YNFNLFHTVQQGFIAQTGD-PSGAGDGGSSI 66
            :.::|.:...||....|....||:.|...:.   |..:.||.|.:.|:.|.|| ..|.|.||.||
Mouse    54 DESVGRVVFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSI 118

  Fly    67 WGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTS-LDGNHCVIGEVV 130
            :|      :||.:..|  |:.|...|.:|:.:|||:..|||||:|..:  || |||.|.|.|:|:
Mouse   119 YG------ERFPDENF--KLKHYGPGWVSMANAGKDTNGSQFFITTVK--TSWLDGKHVVFGKVL 173

  Fly   131 EGHEVLRKLNDAIVDDSFRPYQDIRITHT--VVLEDPF 166
            ||.:|:||:.....|...:|.:|:.|..:  :.:|.||
Mouse   174 EGMDVVRKVESTKTDSRDKPLKDVIIVDSGKIEVEKPF 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 59/168 (35%)
RRM_PPIL4 237..319 CDD:409681
PRK12678 344..>510 CDD:237171
U2AF_lg 467..>572 CDD:273727
PpibNP_035279.2 cyclophilin_ABH_like 45..203 CDD:238907 56/158 (35%)
Prevents secretion from ER. /evidence=ECO:0000250 213..216
Blue background indicates that the domain is not in the aligned region.

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