Protein Alignment CG5808 and cyn-8

DIOPT Version :10

• Sequence 1: NP_651291.1
• Gene: CG5808 / 42957
• FlyBaseID: FBgn0027617
• Length: 653
• Species: Drosophila melanogaster
• Sequence 2: NP_509507.1
• Gene: cyn-8 / 181136
• WormBaseID: WBGene00000884
• Length: 447
• Species: Caenorhabditis elegans
• Alignment Length: 575
• Identity: 126/575 - (21%)
• Similarity: 210/575 - (36%)
• Gaps: 193/575 - (33%)

  Fly    37 YNFNLFHTVQQGFIAQTGD-PSGAGDGGSSIWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAG 100
            |..::||.|.:||:.|.|| ..|.|.||.||:|       |.|:.|.| .:.|....:||:.:.|
 Worm    59 YQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYG-------RTFDDENL-ALKHKKPYLLSMANRG 115

  Fly   101 KNLVGSQFFLTLGENLTSLDGNHCVIGEVVEGHEVLRKLNDAIVDDSFRPYQDIRITHTVVLEDP 165
            .:..|||||:| .|.:..|||.|||.|||::|.||::.:.:....:..:|...:.|||
 Worm   116 PDTNGSQFFIT-SEEVPHLDGKHCVFGEVIKGVEVVKAIENLETGNEDKPVCKVEITH------- 172

  Fly   166 FPNPRGLQAPSRSPSPSAERLKNGRIAADEDIDDTDGMTAEEMQEMLAEREAKARATILEIVGDL 230
                            ..|.::.|      |:....|..|.|
 Worm   173 ----------------CGEMVRKG------DVVGNAGAAASE----------------------- 192

  Fly   231 PDADMAPPENVLFVCKLNPVTTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCE 295
                   ||                                    .||       |:.||:.
 Worm   193 -------PE------------------------------------PTG-------VKMEDEP--- 204

  Fly   296 AAYFKMDNVLIDDRRIHVDFSQSVSKVTWRGKGRGIEGDYRKLDFNNLRDDKDHRKPNNGRSRTE 360
                |..|.|:                                           |...:..||.|
 Worm   205 ----KTRNWLM-------------------------------------------RYSKSPESREE 222

  Fly   361 DHKERNRTEDFRNRMSSAERRKAREQRHQEQSERDVRKNLQRRTRSKEKDEKSVYRSKKSQNESV 425
            ..|:::..|:.|:|...:..|..|::|.:.:|        |.|.|::.:|::|....:..:||.
 Worm   223 KKKDKHGREEKRDRRRRSNDRHGRDRRSRSRS--------QSRDRNRRRDDRSGRDGRVGRNER- 278

  Fly   426 RENSNRERNRNEKRSSRSRDATHRR------YSRSRDREERRPSRPRDQLGRRSRSRDQKERRRS 484
            .:.|.|:..|:::||:.::|....|      :...|.|....|...|::..:.:....||  |:.
 Worm   279 DDRSGRDERRDDRRSAPTKDGIKVRGRGKLTFLGGRTRSTTPPHWKREESKKLTLEAHQK--RQE 341

  Fly   485 RPREQNERRRSRSRDQTGKRPTQNRDRNDSRRFHSPQEGRRNDERSHRETSRNQRRSPERRQQSR 549
            ...|:.:|...|.:::..:.....::|.:       ::.:|..||..:|..|..:|..| .::|.
 Worm   342 ELEERQKRAAQREKEEAERNARLEKERVE-------RQNQRELERQKQEAERELKRQQE-NEESG 398

  Fly   550 NREDHRMDTHSSPNKSHEKKRKLSVEKSKKQAKKSKRAASSSSDSSESSSESESD 604
            ||...|.....|.|...|      :|:.|.::...::.:||||.||.|...|:||
 Worm   399 NRRRRRSSRSGSENDESE------LEEPKNRSASPRKRSSSSSSSSSSGHSSDSD 447

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5808	NP_651291.1	cyclophilin_RRM	4..169	CDD:238902	47/132 (36%)
		RRM_PPIL4	237..319	CDD:409681	10/81 (12%)
		PRK12678	344..>510	CDD:237171	36/171 (21%)
		U2AF_lg	467..>572	CDD:273727	21/104 (20%)
cyn-8	NP_509507.1	cyclophilin	10..174	CDD:469651	47/146 (32%)
		ATP-synt_Fo_b	<324..391	CDD:349951	13/75 (17%)