DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG5808 and cyn-1

DIOPT Version :9

Sequence 1:	NP_651291.1	Gene:	CG5808 / 42957	FlyBaseID:	FBgn0027617	Length:	653	Species:	Drosophila melanogaster
Sequence 2:	NP_506561.1	Gene:	cyn-1 / 179936	WormBaseID:	WBGene00000877	Length:	192	Species:	Caenorhabditis elegans

Alignment Length:	145	Identity:	46/145 - (31%)
Similarity:	68/145 - (46%)	Gaps:	20/145 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 ETTMGDLTVDLFISERPIACLNFLKLCR----------LKYYNFNLFHTVQQGFIAQTGD-PSGA 59
            |...|.:|::||....|....||..||.          ..::..:.||.:...|:.|.|| ....
Worm    32 EEPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHN 96

  Fly    60 GDGGSSIWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHC 124
            |.||.||:|      .:|.:..|  .:.|:..|.||:.:||.|..|||||:...:. ..|||.|.
Worm    97 GTGGESIYG------NKFKDENF--DLKHTGPGCLSMANAGPNTNGSQFFICTVDT-PWLDGGHV 152

  Fly   125 VIGEVVEGHEVLRKL 139
            |.|:|.:|..|::|:
Worm   153 VFGQVTDGMSVVKKI 167

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG5808	NP_651291.1	cyclophilin_RRM	4..169	CDD:238902	46/145 (32%)
		RRM	<237..445	CDD:223796
		RRM_PPIL4	237..319	CDD:240681
cyn-1	NP_506561.1	cyclophilin_ABH_like	22..187	CDD:238907	46/145 (32%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0652
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900