DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and cyn-9

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_497745.1 Gene:cyn-9 / 175471 WormBaseID:WBGene00000885 Length:309 Species:Caenorhabditis elegans


Alignment Length:465 Identity:97/465 - (20%)
Similarity:151/465 - (32%) Gaps:200/465 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VIETTMGDLTVDLFISERPIACLNFLKLC------------RLKYYNFNLFHTVQQGFIAQTGD- 55
            |.|..:|.:.:.||:.:.|..|.||..||            || :|..|.||.:.:.|:.|.|| 
 Worm    13 VDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARL-HYKQNEFHRIVKKFMIQGGDI 76

  Fly    56 PSGAGDGGSSIWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLD 120
            ..|.|.||.||:|       |:|:.|.. |:.||...:||:.:.|.|...||||:|... ....:
 Worm    77 TEGDGRGGFSIYG-------RYFDDEKF-KLKHSRPYLLSMANKGPNSNSSQFFITTAA-APHCN 132

  Fly   121 GNHCVIGEVVEGHEVLRKLNDAIVDDSFRPYQDIRITHTVVLEDPFPNPRGLQAPSRSPSPSAER 185
            |.|.|.||||:|..|:..:::..|||..:|...:.|::                           
 Worm   133 GKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAKVLISN--------------------------- 170

  Fly   186 LKNGRIAADEDIDDTDGMTAEEMQEMLAEREAKARATILEIVGDLPDADMAPPENVLFVCKLNPV 250
                                                     .|:|             |.|..|:
 Worm   171 -----------------------------------------CGEL-------------VKKKKPL 181

  Fly   251 TTDDDLEIIFSSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIHVDF 315
            .||::|                                       ||..:..|            
 Worm   182 KTDEEL---------------------------------------AAALEEKN------------ 195

  Fly   316 SQSVSKVTWRGKGRGIEGDYRKLDFNNLRDDKDHRKPNNGRSRTEDHKERNRTEDFRNRMSSAER 380
                                     ||.||::..:.|.:...|.:|:::       ::.|.:.:|
 Worm   196 -------------------------NNARDNEIPKCPKSWLYRDDDNEK-------KHEMRNDKR 228

  Fly   381 RKAREQRHQEQSERDVRKNLQRRTRSKEKDEKSVYRSKKSQNESVR-ENSNRERNRNEKRSSRSR 444
            |:.|.:|.:.            |:..|.:|.|...|...|:::..| ||....|.|...|..|.|
 Worm   229 REYRSRRSRS------------RSHEKNRDYKKENRGDSSRSQPRRDENGITVRGRGGVRFRRER 281

  Fly   445 DATHRRYSRS 454
            .||...:.|:
 Worm   282 SATPEHWRRN 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 57/177 (32%)
RRM <237..445 CDD:223796 34/208 (16%)
RRM_PPIL4 237..319 CDD:240681 9/81 (11%)
cyn-9NP_497745.1 cyclophilin 6..172 CDD:294131 57/236 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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