Protein Alignment CG5808 and cyn-16

DIOPT Version :10

• Sequence 1: NP_651291.1
• Gene: CG5808 / 42957
• FlyBaseID: FBgn0027617
• Length: 653
• Species: Drosophila melanogaster
• Sequence 2: NP_496562.3
• Gene: cyn-16 / 174843
• WormBaseID: WBGene00000892
• Length: 483
• Species: Caenorhabditis elegans
• Alignment Length: 538
• Identity: 121/538 - (22%)
• Similarity: 217/538 - (40%)
• Gaps: 132/538 - (24%)

  Fly     3 VVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSSIW 67
            |.:|||.||:.::|:..|.|:||.||::||...||...:||.:.:.||.|.|||:..|.||.||:
 Worm    15 VTLETTAGDIEIELWTKEAPLACRNFIQLCMENYYKGTVFHRLVKNFILQGGDPTATGTGGESIY 79

  Fly    68 GVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGE-NLTSLDGNHCVIGEVVE 131
            |       :.|:.|...::..:..|::.:.:||::..|||||.|:|: ....||..|.:.|:|.
 Worm    80 G-------KPFKDEIHQRLKFNRRGIVGMANAGRDDNGSQFFFTIGDRGAPELDKKHTIFGKVT- 136

  Fly   132 GHEVLRKLNDAIVD-DSFRPYQDIRITHTVVLEDPFPNPRGLQAPSRSPSPSAERLKNGRIAADE 195
            |..:...|....|: :..||....:||...:..:||.:   |:...:.....:||.|..::...:
 Worm   137 GPTLFNMLKITEVETEGDRPVTFYKITGARIDNNPFDD---LKPREKRKKEKSERRKEPKVVETK 198

  Fly   196 DIDDTD-GMTAEEMQEMLAEREAKARATILEIVGDLPDADMAPPENVLFVCKLNPVTTDDDLEII 259
            ..:... |...||.::.||....|. |...:...|..|.|      .:.:.|...||.|:
 Worm   199 KTNLLSFGDEVEEDEQELAVFNKKT-ANKPKSAHDAHDND------TVGLSKQAAVTRDE----- 251

  Fly   260 FSSFGVLKGC----EVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIHVDFSQSVS 320
            .|::     |    :.::|..:..|::...::...::..|.
 Worm   252 MSNY-----CPEDDDTVKDESSISSIREKLMKKSQKRKLEE------------------------ 287

  Fly   321 KVTWRGKGRGIEGDYRKLDFNNLRDDKDHRKPNNGRSRTEDHKERNRTEDFRNRMSSA-----ER 380
                  |..|.:.||.|:    :.|::      |.:.|....|..:..:|.:.....|     |:
 Worm   288 ------KAGGEDEDYEKM----IEDER------NAKERETIDKMNSELKDMQKEYMKALRPVKEK 336

  Fly   381 RKA-REQRHQE--QSERDVRKNLQRRTRS--KEKD----------------------EKSVYRSK 418
            :|| :::...|  ||..|::...:.:|:.  |:||                      :|::...|
 Worm   337 KKAVKDETLSEAMQSYHDLKMRFKSKTKDVVKQKDAQREGQTMNMLERFKNRLGASNQKAILFDK 401

  Fly   419 KSQ-NESVRENSNRERNRNEKRSSRSRDA---------THR-------RYSRSRDREERRPSR-- 464
            |.: .|.:..|.. |....:|..:...||         :||       ..|:::|...|..|.
 Worm   402 KIEIKEPILRNEG-EEGEEKKFGTMDLDAEDIQGTSWMSHRFKAEDVVLSSKAKDANMREESEDW 465

  Fly   465 -----PRDQLGRRSRSRD 477
                 ||:::.:|.|..:
 Worm   466 YHITDPRNKMAKRRRGEE 483

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5808	NP_651291.1	cyclophilin_RRM	4..169	CDD:238902	56/166 (34%)
		RRM_PPIL4	237..319	CDD:409681	9/85 (11%)
		PRK12678	344..>510	CDD:237171	36/190 (19%)
		U2AF_lg	467..>572	CDD:273727	2/11 (18%)
cyn-16	NP_496562.3	cyclophilin_CeCYP16-like	8..175	CDD:238906	57/170 (34%)
		CWC27_CTD	369..446	CDD:412084	13/77 (17%)