DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and cyn-11

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_495855.1 Gene:cyn-11 / 174394 WormBaseID:WBGene00000887 Length:183 Species:Caenorhabditis elegans


Alignment Length:162 Identity:49/162 - (30%)
Similarity:76/162 - (46%) Gaps:23/162 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VVIETT-----MGDLTVDLFISERPIACLNFLKLCRLKY--------YNFNLFHTVQQGFIAQTG 54
            |.:|.|     :|.:.::||....|....||.:.|..:|        |....||.|.:.|:.|.|
 Worm    19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVPNGYKNCTFHRVIKDFMIQGG 83

  Fly    55 D-PSGAGDGGSSIWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTS 118
            | .:|.|.|..||:|      .:|.:..|  ::.|...||||:.:||.:..|.|||:|..:. ..
 Worm    84 DFCNGDGTGLMSIYG------SKFRDENF--ELKHIGPGMLSMANAGSDTNGCQFFITCAKT-DF 139

  Fly   119 LDGNHCVIGEVVEGHEVLRKLNDAIVDDSFRP 150
            ||..|.|.|.|::|...:||:.:.....:.:|
 Worm   140 LDNKHVVFGRVLDGMLTVRKIENVPTGANNKP 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 48/161 (30%)
RRM <237..445 CDD:223796
RRM_PPIL4 237..319 CDD:240681
cyn-11NP_495855.1 cyclophilin 12..183 CDD:294131 49/162 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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