DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and sig-7

DIOPT Version :9

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:NP_492343.2 Gene:sig-7 / 172664 WormBaseID:WBGene00000890 Length:427 Species:Caenorhabditis elegans


Alignment Length:470 Identity:228/470 - (48%)
Similarity:311/470 - (66%) Gaps:46/470 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSVVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSS 65
            |:|:||||:|||.:|||:.|||...|||||||:.||||.|.||::::.::||||||:|.|.||.|
 Worm     1 MAVLIETTLGDLIIDLFVKERPRCSLNFLKLCKKKYYNLNQFHSIERNYVAQTGDPTGTGKGGES 65

  Fly    66 IWGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTSLDGNHCVIGEVV 130
            ::..:.|.|.|:||.|.|||:.|:..|::|.|:.|.|::|||||:||||||..||..|.:.|:|.
 Worm    66 VYSDMYGEQGRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFITLGENLDYLDDQHTIFGQVT 130

  Fly   131 EGHEVLRKLNDAIVDDSFRPYQDIRITHTVVLEDPFPNPRGLQAPSRSPSPSAERL-KNGRIAAD 194
            ||.|.|.|||:.:.|.:.||::||||:||:||:|||.....:..|.|||||:.|.| |..:||.|
 Worm   131 EGLETLEKLNEQLADTNNRPFKDIRISHTIVLDDPFDEDARISFPPRSPSPTYEMLVKTDQIALD 195

  Fly   195 EDIDDTDGMTAEEMQEMLAEREAKARATILEIVGDLPDADMAPPENVLFVCKLNPVTTDDDLEII 259
            |..|:.:|.||||:.|.|.:||...:|.|||:||||.|||..|||||||||||||||||:|||||
 Worm   196 EKEDEDEGKTAEEIAEELQQREMAEQAQILEMVGDLKDADEVPPENVLFVCKLNPVTTDEDLEII 260

  Fly   260 FSSFGVLKGCEVIRDRKTGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTW 324
            ||.||.:..||::|||::||||||||:||::.||||.|:||||||||||||||||||||||:   
 Worm   261 FSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFSQSVSQ--- 322

  Fly   325 RGKGRGIEGDYRKLDFNNLRDDKDHRKPNNGRSRTEDHKERNRTEDFRNRMSSAERRKAREQRHQ 389
                     :|:                         :|.:::.::...|..|.:||...::.||
 Worm   323 ---------NYK-------------------------YKPKSQQQEAPKRRQSPQRRPEVKRSHQ 353

  Fly   390 EQ-SERDVRKNLQRRTRSKEKDEKSVYRSKKSQNESVRENSNRERNRNEKRSSRSRDATHRRYSR 453
            .. |.|      :||:.|.:||:|..||.:.::.....:| :|:|:|:.:.::|.|...||...|
 Worm   354 RSPSPR------RRRSPSPKKDKKRDYRREPARRRRSSDN-HRDRDRSYRDNNRDRRDNHRDSDR 411

  Fly   454 SRDREERRPSRPRDQ 468
            .|.|.:|.|.|.||:
 Worm   412 DRRRHDRSPDRRRDR 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 90/164 (55%)
RRM <237..445 CDD:223796 91/208 (44%)
RRM_PPIL4 237..319 CDD:240681 65/81 (80%)
sig-7NP_492343.2 cyclophilin_RRM 4..169 CDD:238902 90/164 (55%)
RRM 128..>346 CDD:223796 129/254 (51%)
RRM_PPIL4 238..320 CDD:240681 65/81 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164168
Domainoid 1 1.000 192 1.000 Domainoid score I1890
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12126
Inparanoid 1 1.050 436 1.000 Inparanoid score I946
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1436035at2759
OrthoFinder 1 1.000 - - FOG0005630
OrthoInspector 1 1.000 - - oto18668
orthoMCL 1 0.900 - - OOG6_102469
Panther 1 1.100 - - LDO PTHR45843
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R965
SonicParanoid 1 1.000 - - X4034
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.930

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