DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5808 and LOC1275510

DIOPT Version :10

Sequence 1:NP_651291.1 Gene:CG5808 / 42957 FlyBaseID:FBgn0027617 Length:653 Species:Drosophila melanogaster
Sequence 2:XP_314761.5 Gene:LOC1275510 / 1275510 VectorBaseID:AGAMI1_005100 Length:679 Species:Anopheles gambiae


Alignment Length:158 Identity:64/158 - (40%)
Similarity:91/158 - (57%) Gaps:13/158 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SVVIETTMGDLTVDLFISERPIACLNFLKLCRLKYYNFNLFHTVQQGFIAQTGDPSGAGDGGSSI 66
            :.|:.|||||:.:.||..|.|....||....:..|||.:|||.|.:||:.|||||:|.|.||.||
Mosquito   526 NAVLHTTMGDVHLRLFGKECPKTVENFCVHSKNGYYNGHLFHRVIKGFMIQTGDPTGTGTGGQSI 590

  Fly    67 WGVVEGPQKRFFEAEFLPKINHSSAGMLSLVSAGKNLVGSQFFLTLGENLTS--LDGNHCVIGEV 129
            ||   |.    |:.||...:.|.....:|:.:||.|..|||||:|:   |.:  ||..|.|.|.|
Mosquito   591 WG---GE----FKDEFCSTLKHDRPYTVSMANAGPNTNGSQFFITV---LPTPWLDNKHTVFGRV 645

  Fly   130 VEGHEVLRKLNDAIVD-DSFRPYQDIRI 156
            .:|.|:::.:.:|..: .:.:||.:|||
Mosquito   646 HKGMEIVQNICNAKTNPKTDKPYDEIRI 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5808NP_651291.1 cyclophilin_RRM 4..169 CDD:238902 64/156 (41%)
RRM_PPIL4 237..319 CDD:409681
PRK12678 344..>510 CDD:237171
U2AF_lg 467..>572 CDD:273727
LOC1275510XP_314761.5 None
Blue background indicates that the domain is not in the aligned region.

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